Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   BRL64_RS04135 Genome accession   NZ_CP018100
Coordinates   821453..822244 (+) Length   263 a.a.
NCBI ID   WP_081124118.1    Uniprot ID   -
Organism   Bacillus safensis strain BRM1     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 816453..827244
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BRL64_RS04100 (BRL64_04045) - 816539..817087 (+) 549 WP_024425227.1 thioredoxin family protein -
  BRL64_RS04105 (BRL64_04050) - 817421..817888 (+) 468 WP_024425226.1 thiol-disulfide oxidoreductase DCC family protein -
  BRL64_RS04110 (BRL64_04055) - 817925..819181 (-) 1257 WP_081124117.1 transcriptional regulator -
  BRL64_RS04115 (BRL64_04060) - 819456..820043 (+) 588 WP_061110587.1 nitroreductase family protein -
  BRL64_RS04120 (BRL64_04065) - 820082..820237 (-) 156 WP_024425223.1 YfhD family protein -
  BRL64_RS04125 (BRL64_04070) - 820299..820409 (-) 111 WP_017358836.1 YfhE family protein -
  BRL64_RS04130 (BRL64_04075) - 820462..821358 (-) 897 WP_046314308.1 TIGR01777 family oxidoreductase -
  BRL64_RS04135 (BRL64_04080) recX 821453..822244 (+) 792 WP_081124118.1 recombination regulator RecX Regulator
  BRL64_RS04140 (BRL64_04085) - 822248..822562 (+) 315 WP_025093475.1 YfhH family protein -
  BRL64_RS04145 - 822585..822758 (-) 174 WP_008360604.1 YpzG family protein -
  BRL64_RS04150 (BRL64_04090) - 822784..822933 (-) 150 WP_003217849.1 small, acid-soluble spore protein K -
  BRL64_RS04155 (BRL64_04095) - 823050..823322 (+) 273 WP_024425219.1 YfhJ family protein -
  BRL64_RS04160 (BRL64_04100) - 823623..824606 (+) 984 WP_081124119.1 glycosyltransferase family 2 protein -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30649.12 Da        Isoelectric Point: 6.6685

>NTDB_id=205743 BRL64_RS04135 WP_081124118.1 821453..822244(+) (recX) [Bacillus safensis strain BRM1]
MPYITKISAQKNNTERVNIFLDEKYAFSVDLDVLVQHDLKKGKELEEADIIEIQFGDSVKKGFQQAVDYLSYRMRSVKEV
TDYLTKKEIPAPAISEIIHKLKHYKYVNDLEFAEAYVSTHRKTNSKGPSVLKKELKLKGIDDDTIEQALSQYPDDLQLEE
AVKQVLKLVKKEKNRSAKEIEQRIKLQLQRKGFSFEIIDKALQEAYDGQEEEKEEEALLYMLEKAKRKVGYDGSFEKKMK
VKQFLFRKGFDLDTIDHVLDKGE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=205743 BRL64_RS04135 WP_081124118.1 821453..822244(+) (recX) [Bacillus safensis strain BRM1]
ATGCCTTATATTACAAAAATTTCTGCTCAGAAAAACAATACCGAGCGGGTCAACATCTTTCTTGATGAAAAGTACGCCTT
TAGCGTTGATTTAGATGTGCTCGTCCAGCACGATTTGAAAAAAGGAAAAGAGCTGGAAGAAGCAGATATCATTGAGATTC
AATTCGGTGATTCAGTGAAAAAAGGATTTCAGCAGGCAGTTGATTATTTATCCTACCGCATGAGATCAGTGAAAGAAGTC
ACCGATTATTTAACGAAAAAAGAAATCCCTGCACCTGCTATTAGTGAAATTATACACAAATTAAAGCATTATAAGTATGT
AAATGATCTTGAATTTGCAGAAGCCTATGTCAGCACCCACCGGAAAACGAACAGCAAAGGACCGTCCGTCCTAAAAAAAG
AATTGAAGCTCAAGGGGATAGACGATGACACGATTGAACAGGCGCTGTCTCAATACCCTGATGACCTACAGCTGGAGGAA
GCGGTAAAGCAGGTTCTCAAACTTGTCAAAAAAGAAAAAAATCGTTCTGCAAAAGAGATCGAGCAGCGCATCAAGCTGCA
GCTGCAGCGAAAGGGATTTTCGTTTGAGATCATTGATAAAGCCCTTCAAGAAGCCTATGATGGACAAGAAGAGGAAAAGG
AAGAAGAAGCCCTCCTTTATATGCTGGAGAAGGCAAAACGCAAGGTAGGATATGACGGATCATTTGAAAAGAAGATGAAA
GTGAAGCAATTTTTATTCAGAAAAGGCTTTGATCTCGATACAATTGATCACGTTTTAGACAAAGGGGAATGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

63.498

100

0.635

Multiple sequence alignment