Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   Cj1352 Genome accession   NC_002163
Coordinates   1284008..1284976 (+) Length   322 a.a.
NCBI ID   YP_002344740.1    Uniprot ID   Q0P8Q7
Organism   Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1279008..1289976
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Cj1347c cdsA 1279918..1280643 (-) 726 YP_002344735.1 phosphatidate cytidylyltransferase -
  Cj1348c - 1280652..1280990 (-) 339 YP_002344736.1 hypothetical protein -
  Cj1349c - 1280992..1282299 (-) 1308 YP_002344737.1 fibronectin/fibrinogen-binding protein -
  Cj1350 mobA 1282361..1282936 (+) 576 YP_002344738.1 molybdopterin-guanine dinucleotide biosynthesis protein -
  Cj1351 pldA 1282933..1283922 (+) 990 YP_002344739.1 phospholipase A -
  Cj1352 ceuB 1284008..1284976 (+) 969 YP_002344740.1 enterochelin uptake permease Machinery gene
  Cj1353 ceuC 1284969..1285907 (+) 939 YP_002344741.1 enterochelin uptake permease -
  Cj1354 ceuD 1285904..1286659 (+) 756 YP_002344742.1 enterochelin uptake ATP-binding protein -
  Cj1355 ceuE 1286672..1287664 (+) 993 YP_002344743.1 enterochelin uptake substrate-binding protein -
  Cj1356c - 1287890..1288444 (-) 555 YP_002344744.1 integral membrane protein -

Sequence

Protein


Download         Length: 322 a.a.        Molecular weight: 35469.40 Da        Isoelectric Point: 9.6678

>NTDB_id=20568 Cj1352 YP_002344740.1 1284008..1284976(+) (ceuB) [Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819]
MFFKHILSLKVLIALLLFFGMISLFIGVISINVKDILNLNSTQLEIITLTRIPRLIAILLTGMSLSICGLIMQQLTQNKF
VSPTTAGTMDCAKFGILISLIFFTGASFFTQAIIASIFALLGSFIFIQILRKIKLKDVIFVPLIGLMFGGIISAITTFFA
YALNYIQNIQGWLQGSMANVMQGNYELLYISLPLFILAYFLAHKITIVGMGEDIALNLGISYNGILFLGLMIVSIITSLV
IVSVGIIPFLGLIIPNLVALYLGDNLRKNLIYIALCGALFLLVCDIISRLVIFPFEMPLSITTGVLGSLIFIFLLLKRKV
YA

Nucleotide


Download         Length: 969 bp        

>NTDB_id=20568 Cj1352 YP_002344740.1 1284008..1284976(+) (ceuB) [Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819]
TTGTTTTTTAAGCATATATTGAGTTTAAAAGTGCTTATAGCTTTACTTTTATTCTTTGGAATGATAAGTTTATTTATAGG
AGTTATCAGTATCAATGTAAAAGATATTCTTAATCTTAACTCCACTCAACTAGAAATCATAACTCTCACAAGAATTCCTA
GACTTATAGCGATTTTACTCACAGGAATGAGTCTTAGTATATGTGGGCTTATCATGCAACAACTCACGCAAAATAAATTC
GTTTCCCCAACTACAGCAGGGACCATGGATTGTGCTAAATTTGGCATACTTATTTCTTTAATATTTTTTACTGGAGCGTC
TTTTTTCACTCAAGCTATCATTGCTTCTATATTTGCACTTTTGGGTTCTTTTATATTTATCCAAATTTTAAGAAAAATCA
AACTCAAAGATGTGATTTTTGTACCTTTGATAGGCTTGATGTTTGGAGGTATTATTAGTGCTATAACCACTTTTTTTGCC
TATGCTTTAAATTATATACAAAATATCCAAGGTTGGCTACAAGGCAGTATGGCAAATGTTATGCAGGGAAATTATGAATT
GCTCTACATTTCTTTACCACTTTTTATACTTGCTTATTTTTTAGCTCATAAAATCACCATAGTTGGCATGGGTGAAGATA
TAGCTTTAAATCTTGGAATTTCTTATAATGGTATATTATTTTTAGGCTTAATGATTGTAAGCATTATCACTAGCTTAGTG
ATTGTAAGCGTTGGGATTATCCCTTTTTTAGGGCTAATTATCCCAAATTTAGTAGCTCTTTATCTAGGTGATAATCTTAG
AAAAAATCTTATCTATATAGCACTTTGTGGAGCTTTGTTTTTACTTGTTTGCGATATCATTTCAAGACTTGTTATCTTTC
CTTTTGAAATGCCTTTAAGTATCACTACAGGTGTTTTAGGGTCTTTAATCTTTATCTTTCTTTTACTAAAAAGGAAAGTT
TATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(15-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q0P8Q7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

99.068

100

0.991

Multiple sequence alignment