Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | CLH63_RS25265 | Genome accession | NZ_CP023255 |
| Coordinates | 5232059..5232424 (+) | Length | 121 a.a. |
| NCBI ID | WP_003084587.1 | Uniprot ID | A0A0H2ZKW2 |
| Organism | Pseudomonas aeruginosa strain CCUG 70744 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 5227059..5237424
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CLH63_RS25235 (CLH63_25240) | pyrR | 5227681..5228193 (-) | 513 | WP_003084574.1 | bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR | - |
| CLH63_RS25240 (CLH63_25245) | ruvX | 5228305..5228739 (-) | 435 | WP_003084575.1 | Holliday junction resolvase RuvX | - |
| CLH63_RS25245 (CLH63_25250) | - | 5228739..5229308 (-) | 570 | WP_003084577.1 | YqgE/AlgH family protein | - |
| CLH63_RS25250 (CLH63_25255) | - | 5229357..5230250 (-) | 894 | WP_003162015.1 | energy transducer TonB | - |
| CLH63_RS25255 (CLH63_25260) | gshB | 5230397..5231350 (-) | 954 | WP_003100943.1 | glutathione synthase | - |
| CLH63_RS25260 (CLH63_25265) | pilG | 5231605..5232012 (+) | 408 | WP_003084583.1 | twitching motility response regulator PilG | Regulator |
| CLH63_RS25265 (CLH63_25270) | pilH | 5232059..5232424 (+) | 366 | WP_003084587.1 | twitching motility response regulator PilH | Machinery gene |
| CLH63_RS25270 (CLH63_25275) | - | 5232475..5233011 (+) | 537 | WP_003084590.1 | chemotaxis protein CheW | - |
| CLH63_RS25275 (CLH63_25280) | pilJ | 5233096..5235144 (+) | 2049 | WP_003100940.1 | chemotaxis chemoreceptor PilJ | - |
| CLH63_RS25280 (CLH63_25285) | pilK | 5235205..5236080 (+) | 876 | WP_003100938.1 | type 4 fimbrial methyltransferase PilK | - |
Sequence
Protein
Download Length: 121 a.a. Molecular weight: 13273.30 Da Isoelectric Point: 5.1961
>NTDB_id=205677 CLH63_RS25265 WP_003084587.1 5232059..5232424(+) (pilH) [Pseudomonas aeruginosa strain CCUG 70744]
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVII
VTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVII
VTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
Nucleotide
Download Length: 366 bp
>NTDB_id=205677 CLH63_RS25265 WP_003084587.1 5232059..5232424(+) (pilH) [Pseudomonas aeruginosa strain CCUG 70744]
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGTCACCA
GGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCG
TCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAATTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATC
GTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCTCGCGACTACCTGACCAAGCCGGTGGA
CGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGTCACCA
GGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCG
TCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAATTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATC
GTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCTCGCGACTACCTGACCAAGCCGGTGGA
CGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
36.975 |
98.347 |
0.364 |