Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   DN94_05580 Genome accession   CP007565
Coordinates   1069092..1069574 (-) Length   160 a.a.
NCBI ID   AHX75149.1    Uniprot ID   -
Organism   Streptococcus agalactiae strain 138spar     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1064092..1074574
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DN94_05560 - 1064351..1066033 (-) 1683 AHX75145.1 acetolactate synthase -
  DN94_05565 - 1066143..1067369 (-) 1227 AHX75146.1 hypothetical protein -
  DN94_05570 - 1067359..1068549 (-) 1191 AHX75147.1 membrane protein -
  DN94_05575 - 1068641..1069102 (-) 462 AHX75148.1 DNA mismatch repair protein MutT -
  DN94_05580 mutX 1069092..1069574 (-) 483 AHX75149.1 DNA mismatch repair protein MutT Machinery gene
  DN94_05585 - 1069792..1073010 (+) 3219 AHX75150.1 hyaluronate lyase -
  DN94_05590 - 1073062..1074108 (-) 1047 AHX75151.1 dTDP-glucose 4,6-dehydratase -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18913.33 Da        Isoelectric Point: 4.5116

>NTDB_id=20564 DN94_05580 AHX75149.1 1069092..1069574(-) (mutX) [Streptococcus agalactiae strain 138spar]
MTKLATICYIDNGKELLLLHRNKKENDVHEGKWISVGGKLEAGETPDECAKREILEETHLTVKKMDFKGVITFPEFTPGH
DWYTYVFKVTDYEGELISDDESREGTLEWVPYDQVLYKPTWQGDYEIFKWILEDVPFFSAKFVYDEHQNLIEKTVNFYEK

Nucleotide


Download         Length: 483 bp        

>NTDB_id=20564 DN94_05580 AHX75149.1 1069092..1069574(-) (mutX) [Streptococcus agalactiae strain 138spar]
ATGACTAAATTAGCAACAATTTGTTACATTGACAATGGCAAGGAATTACTTCTATTGCACCGCAACAAAAAAGAGAATGA
TGTTCATGAGGGAAAGTGGATCTCGGTAGGCGGTAAACTGGAGGCAGGTGAAACTCCTGATGAATGTGCTAAGCGTGAAA
TTCTAGAAGAAACTCATTTAACAGTAAAAAAAATGGATTTTAAAGGAGTCATCACTTTTCCTGAATTTACGCCAGGTCAT
GATTGGTATACCTATGTCTTTAAAGTAACAGATTATGAAGGAGAGTTAATTTCAGATGATGAATCACGAGAAGGAACCTT
AGAATGGGTACCATATGATCAAGTTCTCTATAAGCCAACGTGGCAAGGAGATTACGAAATTTTTAAATGGATTTTAGAAG
ATGTTCCTTTCTTTTCTGCTAAGTTTGTTTATGATGAACACCAAAATTTAATTGAAAAGACGGTTAATTTTTATGAAAAA
TAG

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

71.069

99.375

0.706

Multiple sequence alignment