Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   KPH11_RS09620 Genome accession   NZ_CP018056
Coordinates   1914268..1914864 (-) Length   198 a.a.
NCBI ID   WP_004150836.1    Uniprot ID   A0A0H3GL50
Organism   Klebsiella pneumoniae subsp. pneumoniae strain H11     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1909268..1919864
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KPH11_RS09605 (KPH11_09510) helD 1909476..1911530 (-) 2055 WP_099761405.1 DNA helicase IV -
  KPH11_RS09610 (KPH11_09515) - 1911655..1912101 (+) 447 WP_099761406.1 YccF domain-containing protein -
  KPH11_RS09615 (KPH11_09520) yccS 1912119..1914254 (+) 2136 WP_002898422.1 YccS family putative transporter -
  KPH11_RS09620 (KPH11_09525) sxy/tfoX 1914268..1914864 (-) 597 WP_004150836.1 TfoX/Sxy family DNA transformation protein Regulator
  KPH11_RS09630 (KPH11_09535) sulA 1915213..1915722 (+) 510 WP_002898418.1 SOS-induced cell division inhibitor SulA -
  KPH11_RS09635 (KPH11_09540) ompA 1916075..1917145 (+) 1071 WP_002898408.1 porin OmpA -
  KPH11_RS09640 (KPH11_09545) matP 1917277..1917729 (-) 453 WP_002898404.1 macrodomain Ter protein MatP -
  KPH11_RS09645 (KPH11_09550) - 1917915..1919672 (+) 1758 WP_004147851.1 AAA family ATPase -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22576.15 Da        Isoelectric Point: 10.1298

>NTDB_id=205400 KPH11_RS09620 WP_004150836.1 1914268..1914864(-) (sxy/tfoX) [Klebsiella pneumoniae subsp. pneumoniae strain H11]
MRKLVCPRLPQFQACVSPLGQLHTRPLFGGYSLAIDDTVFAMVAEGNIYLKACEQSAAYRVEHRNPLLTLRRHGRIVPLK
YYQIDDTLWRDEQQLFRLSLLSWQSAQREKNYRRASGRLKDLPNISFHMELQLIHAGIPDVRTLREVGAQEAWLRLRVNN
ASLSLSVLLALEGAIAGVHAAALPTPRRQELLEWAATR

Nucleotide


Download         Length: 597 bp        

>NTDB_id=205400 KPH11_RS09620 WP_004150836.1 1914268..1914864(-) (sxy/tfoX) [Klebsiella pneumoniae subsp. pneumoniae strain H11]
ATGAGAAAACTAGTTTGTCCGCGGCTCCCGCAATTTCAGGCCTGCGTCTCACCGCTGGGTCAACTGCATACTCGTCCGCT
CTTTGGCGGCTACAGCCTGGCTATTGATGATACGGTGTTTGCGATGGTGGCCGAGGGAAACATTTATCTGAAGGCCTGCG
AGCAGAGCGCTGCTTATCGGGTGGAACATCGTAATCCTCTGTTAACGCTGCGCCGACACGGCCGCATAGTGCCGCTGAAG
TATTATCAAATTGACGACACTTTATGGCGCGATGAGCAGCAGCTTTTTCGGCTATCGCTACTGTCGTGGCAGAGTGCGCA
GCGCGAAAAGAACTACCGACGGGCGTCGGGCCGCCTGAAGGATTTACCTAATATCAGCTTTCATATGGAATTGCAGCTGA
TTCACGCGGGCATACCGGACGTTAGGACGTTGCGGGAAGTTGGTGCGCAGGAGGCATGGTTGAGGCTACGCGTAAATAAT
GCTTCTTTATCGCTGAGCGTATTGCTGGCGCTGGAGGGGGCGATTGCCGGGGTACATGCCGCCGCGCTCCCGACGCCACG
GCGTCAGGAGCTTCTCGAATGGGCGGCTACCCGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(117-194)

TfoX N-terminal domain (TfoX_N)

(16-105)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H3GL50

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

51.269

99.495

0.51

Multiple sequence alignment