Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   BOP93_RS25295 Genome accession   NZ_CP018049
Coordinates   5585729..5586136 (-) Length   135 a.a.
NCBI ID   WP_065885361.1    Uniprot ID   -
Organism   Pseudomonas orientalis strain F9     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 5580729..5591136
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BOP93_RS25280 (BOP93_24485) - 5582733..5584784 (-) 2052 WP_104505012.1 methyl-accepting chemotaxis protein -
  BOP93_RS25285 (BOP93_24490) - 5584781..5585305 (-) 525 WP_065885362.1 chemotaxis protein CheW -
  BOP93_RS25290 (BOP93_24495) pilH 5585318..5585683 (-) 366 WP_014720320.1 twitching motility response regulator PilH -
  BOP93_RS25295 (BOP93_24500) pilG 5585729..5586136 (-) 408 WP_065885361.1 twitching motility response regulator PilG Regulator
  BOP93_RS25300 (BOP93_24505) gshB 5586375..5587328 (+) 954 WP_065896145.1 glutathione synthase -
  BOP93_RS25305 (BOP93_24510) - 5587406..5588311 (+) 906 WP_104505013.1 energy transducer TonB -
  BOP93_RS25310 (BOP93_24515) - 5588519..5589088 (+) 570 WP_065885358.1 YqgE/AlgH family protein -
  BOP93_RS25315 (BOP93_24520) ruvX 5589088..5589525 (+) 438 WP_003195067.1 Holliday junction resolvase RuvX -
  BOP93_RS25320 (BOP93_24525) pyrR 5589673..5590179 (+) 507 WP_065891571.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14950.42 Da        Isoelectric Point: 7.3845

>NTDB_id=205365 BOP93_RS25295 WP_065885361.1 5585729..5586136(-) (pilG) [Pseudomonas orientalis strain F9]
MEQHSNALRVMVIDDSKTIRRTAETLLKNVGCEVITAIDGFDALARIVDHHPHIIFVDIMMPRLDGYQTCALVKNNPAFK
SIPVIMLSSRDGLFDKAKGRTVGVDQFLTKPFSKEELLGAIKAYVPAFAAVEQAH

Nucleotide


Download         Length: 408 bp        

>NTDB_id=205365 BOP93_RS25295 WP_065885361.1 5585729..5586136(-) (pilG) [Pseudomonas orientalis strain F9]
ATGGAACAGCATTCCAACGCCTTGAGAGTGATGGTGATCGACGATTCGAAAACGATCCGCCGCACCGCCGAGACGCTGTT
GAAGAACGTGGGGTGCGAGGTCATCACGGCCATCGACGGTTTCGATGCCCTGGCGCGAATCGTGGATCATCACCCGCACA
TTATCTTTGTCGACATCATGATGCCGCGCCTGGATGGCTACCAGACCTGTGCGCTGGTGAAGAACAACCCGGCGTTCAAG
TCGATCCCGGTGATCATGCTGTCCTCCAGGGACGGCCTGTTCGACAAGGCCAAGGGGCGTACCGTGGGGGTCGATCAGTT
TTTGACCAAGCCTTTCAGCAAGGAAGAACTGCTGGGTGCGATCAAGGCCTATGTGCCTGCCTTCGCCGCAGTAGAACAAG
CACACTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

69.291

94.074

0.652

Multiple sequence alignment