Detailed information NTG0020507

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: JHP_RS07430
• Genome accession: NC_000921
• Coordinates: 1556129..1557568 (-)
• Length: 479 a.a.
• NCBI ID: WP_000748996.1
• Uniprot ID: Q9ZJ97
• Organism: Helicobacter pylori J99
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1551129..1562568

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JHP_RS07405 (jhp1412)	recG	1552266..1554137 (-)	1872	WP_010882646.1	ATP-dependent DNA helicase RecG	-
JHP_RS07410 (jhp1413)	-	1554214..1554561 (+)	348	WP_000837074.1	hypothetical protein	-
JHP_RS07415 (jhp1414)	-	1554565..1555200 (+)	636	WP_000668069.1	outer membrane protein	-
JHP_RS07420 (jhp1415)	-	1555197..1555949 (-)	753	WP_000767522.1	exodeoxyribonuclease III	-
JHP_RS07430 (jhp1416)	comH	1556129..1557568 (-)	1440	WP_000748996.1	hypothetical protein	Machinery gene
JHP_RS07435 (jhp1417)	dnaA	1557789..1559162 (-)	1374	WP_000380659.1	chromosomal replication initiator protein DnaA	-
JHP_RS07440 (jhp1418)	-	1559315..1559857 (+)	543	WP_000923012.1	hypothetical protein	-
JHP_RS07445 (jhp1419)	-	1559902..1560141 (+)	240	WP_000461837.1	DUF2443 domain-containing protein	-
JHP_RS07450 (jhp1420)	glmS	1560142..1561935 (+)	1794	WP_000334347.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-

Sequence

Protein

• Length: 479 a.a.
• Molecular weight: 54595.49 Da
• Isoelectric Point: 7.1208

>NTDB_id=20507 JHP_RS07430 WP_000748996.1 1556129..1557568(-) (comH) [Helicobacter pylori J99]
MKKSLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPRQVLGVYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETTLSPNRPTIPRNTQIVFSSKELKEPHSNPIPSLNAPMQKPQNKPSSSQQSPQNFSYPESKLGSKNSKNSLLQPL
VTPSKVSPTNEVKTPTNDANPPLKHSSQDQENNLFVAPPTEKTLPNNTSSADASENNESNENRDNVEKQAIRDPNIKEFA
CGKWVYDDENLQAYRPSILKRVDKDKEITTDITPCDYSTAENKSGKIITPYTKISVHKTEPLEDPQTFEAKNNFAILQAR
SSTEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAIYERPKQDDQVEPTFYETSELAYSSTRKSEITRNEL
NLNEKFMEFVEVYEGHYLNDIIKESSEYKEWVKNHVRFKEGVCMALEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1440 bp

>NTDB_id=20507 JHP_RS07430 WP_000748996.1 1556129..1557568(-) (comH) [Helicobacter pylori J99]
ATGAAAAAATCCCTTTGTTTGTCTTTCTTTCTGACCTTCTCTAACCCTCTTCAAGCCCTTGTCATTGAGCTTTTAGAAGA
GATTAAAACTTCGCCGCATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTCTAAAGAACCAAGACAAGTTTTAGGCGTTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACTATCACTCACATATCCACGGCAATCGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACCTTAAGCCCTAACCGCCCTACTATCCCTAGAAACACCCAAATCGTTTTTTCTTCAAAAGA
ATTGAAAGAACCGCACTCAAACCCAATACCTTCTTTAAACGCGCCCATGCAAAAACCACAAAATAAACCCAGCTCATCGC
AACAATCTCCTCAAAACTTTTCTTACCCAGAGTCCAAACTAGGCTCTAAAAACTCTAAAAACAGCCTTTTACAGCCTTTA
GTAACTCCTAGCAAAGTAAGCCCCACTAACGAAGTTAAAACGCCAACAAACGACGCTAATCCCCCTTTAAAGCATTCTTC
ACAAGATCAAGAAAACAACCTCTTTGTAGCGCCACCCACTGAAAAAACGCTCCCTAACAACACCTCTAGTGCTGATGCGA
GTGAAAACAATGAAAGCAACGAAAATAGGGATAATGTGGAAAAACAAGCGATTAGAGATCCTAATATCAAAGAATTCGCA
TGCGGGAAGTGGGTTTATGATGATGAAAATTTACAAGCCTATCGCCCAAGCATTTTAAAACGCGTTGATAAAGACAAAGA
GATTACAACAGACATTACCCCTTGCGATTACAGCACCGCTGAAAATAAAAGCGGTAAAATCATTACCCCCTATACTAAAA
TCTCTGTTCATAAAACAGAGCCTTTAGAAGACCCTCAAACTTTTGAAGCTAAAAATAATTTCGCCATTCTCCAAGCCAGA
AGCTCTACAGAAAAGTGTAAAAGGGCTAGAGCGAGAAAAGACGGCACGACCAGGCAATGCTATCTGATAGAAGAGCCTTT
AAAACAAGCGTGGGAGAGCGAGTATGAAATCACCACGCAATTAGTGAAAGCCATATATGAACGCCCCAAACAAGACGATC
AAGTAGAGCCGACTTTTTATGAAACCAGCGAATTGGCTTATTCTTCCACACGAAAAAGCGAAATAACGCGTAATGAATTG
AATTTGAATGAAAAATTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAATCAAAGAGAGCAGCGA
ATACAAAGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGCCTTAGAAATAGAAGAGCAACCACGAG
CCAAAAGCACGCCTTTGAGTATTGAAAACTCTCGTGTTGTGTGTGTCAAAAAGGGGAATTATTTATTCAATGAAGTTTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	93.319	100	0.933