Detailed information
Bioinformatically predicted
Overview
| Name | comFC | Type | Machinery gene |
| Locus tag | JHP_RS07160 | Genome accession | NC_000921 |
| Coordinates | 1498518..1499093 (-) | Length | 191 a.a. |
| NCBI ID | WP_001203557.1 | Uniprot ID | Q9ZJE6 |
| Organism | Helicobacter pylori J99 | ||
| Function | ssDNA transport into the cell (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1493518..1504093
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JHP_RS07150 (jhp1364) | - | 1495233..1496453 (-) | 1221 | WP_000580077.1 | restriction endonuclease subunit S | - |
| JHP_RS07155 (jhp1365) | - | 1496450..1498486 (-) | 2037 | WP_001045380.1 | N-6 DNA methylase | - |
| JHP_RS07160 (jhp1366) | comFC | 1498518..1499093 (-) | 576 | WP_001203557.1 | ComF family protein | Machinery gene |
| JHP_RS07165 (jhp1367) | tmk | 1499081..1499656 (-) | 576 | WP_000289745.1 | dTMP kinase | - |
| JHP_RS07170 (jhp1368) | coaD | 1499660..1500133 (-) | 474 | WP_001169238.1 | pantetheine-phosphate adenylyltransferase | - |
| JHP_RS07175 (jhp1369) | - | 1500133..1500696 (-) | 564 | WP_000780089.1 | UbiX family flavin prenyltransferase | - |
| JHP_RS07180 (jhp1370) | flgA | 1500706..1501362 (-) | 657 | WP_000699043.1 | flagellar basal body P-ring formation chaperone FlgA | - |
| JHP_RS07185 (jhp1371) | uvrD | 1501359..1503404 (-) | 2046 | WP_000505267.1 | DNA helicase UvrD | - |
Sequence
Protein
Download Length: 191 a.a. Molecular weight: 21307.81 Da Isoelectric Point: 8.8914
>NTDB_id=20506 JHP_RS07160 WP_001203557.1 1498518..1499093(-) (comFC) [Helicobacter pylori J99]
MRCLTCLKLSFKPLCPNCLNDLPLSLKLRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVKILQEQG
LNTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKATYGRLRANNAVSYAGKSLEFRANNPRNFTFRGDESLDYFLLDDII
TTGTTLKEALKYLKTLNIKAHFAIALCSADE
MRCLTCLKLSFKPLCPNCLNDLPLSLKLRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVKILQEQG
LNTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKATYGRLRANNAVSYAGKSLEFRANNPRNFTFRGDESLDYFLLDDII
TTGTTLKEALKYLKTLNIKAHFAIALCSADE
Nucleotide
Download Length: 576 bp
>NTDB_id=20506 JHP_RS07160 WP_001203557.1 1498518..1499093(-) (comFC) [Helicobacter pylori J99]
ATGCGTTGTTTAACCTGTTTGAAGCTTTCCTTTAAGCCCCTTTGCCCAAATTGCCTGAACGATTTGCCCTTAAGCTTAAA
GTTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAGCTTATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTACCCTTGCTTTCTCAAAAAGCCGGCGCGGAATTTGTGAAAATCCTGCAAGAACAAGGC
TTGAATACCCCCCTTTATGGCATCGCCATTGACGATAAAATCAAATCCTTTTACTCGCATTCCGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGGAATTTAAAAGCCACTTACGGGCGTTTAAGGGCTAATAATGCTGTTTCGTATGCCGGGAAAAGCTTAG
AATTTCGCGCCAATAACCCACGGAATTTCACTTTCAGGGGCGATGAAAGTTTAGATTATTTCTTGCTAGATGATATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACATCAAAGCGCACTTTGCGATCGCGCTTTG
CAGCGCGGATGAATGA
ATGCGTTGTTTAACCTGTTTGAAGCTTTCCTTTAAGCCCCTTTGCCCAAATTGCCTGAACGATTTGCCCTTAAGCTTAAA
GTTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAGCTTATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTACCCTTGCTTTCTCAAAAAGCCGGCGCGGAATTTGTGAAAATCCTGCAAGAACAAGGC
TTGAATACCCCCCTTTATGGCATCGCCATTGACGATAAAATCAAATCCTTTTACTCGCATTCCGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGGAATTTAAAAGCCACTTACGGGCGTTTAAGGGCTAATAATGCTGTTTCGTATGCCGGGAAAAGCTTAG
AATTTCGCGCCAATAACCCACGGAATTTCACTTTCAGGGGCGATGAAAGTTTAGATTATTTCTTGCTAGATGATATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACATCAAAGCGCACTTTGCGATCGCGCTTTG
CAGCGCGGATGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comFC | Helicobacter pylori 26695 |
97.382 |
100 |
0.974 |