Detailed information NTG0205026

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: BLL65_RS17025
• Genome accession: NZ_CP018007
• Coordinates: 3453281..3454429 (-)
• Length: 382 a.a.
• NCBI ID: WP_007410270.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain sx01604
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3448281..3459429

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BLL65_RS16995 (BLL65_16640)	-	3448417..3449175 (-)	759	WP_007609404.1	ABC transporter ATP-binding protein	-
BLL65_RS17000 (BLL65_16645)	-	3449169..3450116 (-)	948	WP_014416905.1	iron chelate uptake ABC transporter family permease subunit	-
BLL65_RS17005 (BLL65_16650)	ceuB	3450106..3451059 (-)	954	WP_032872883.1	ABC transporter permease	Machinery gene
BLL65_RS17010 (BLL65_16655)	-	3451473..3452837 (+)	1365	WP_007609394.1	aspartate kinase	-
BLL65_RS17015 (BLL65_16660)	-	3452917..3453027 (+)	111	WP_369878517.1	YjcZ family sporulation protein	-
BLL65_RS17020 (BLL65_16665)	phrC	3453178..3453297 (-)	120	WP_003156334.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
BLL65_RS17025 (BLL65_16670)	rapC	3453281..3454429 (-)	1149	WP_007410270.1	Rap family tetratricopeptide repeat protein	Regulator
BLL65_RS17030 (BLL65_16675)	-	3454582..3456015 (-)	1434	WP_161503657.1	sensor histidine kinase	-
BLL65_RS17035 (BLL65_16680)	-	3456002..3456685 (-)	684	WP_032872879.1	response regulator transcription factor	-
BLL65_RS17040 (BLL65_16685)	-	3456898..3458328 (+)	1431	WP_032872876.1	ABC transporter permease	-
BLL65_RS17045 (BLL65_16690)	-	3458343..3459026 (+)	684	WP_032872874.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45475.70 Da
• Isoelectric Point: 4.9916

>NTDB_id=205026 BLL65_RS17025 WP_007410270.1 3453281..3454429(-) (rapC) [Bacillus velezensis strain sx01604]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDHMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=205026 BLL65_RS17025 WP_007410270.1 3453281..3454429(-) (rapC) [Bacillus velezensis strain sx01604]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTACCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCATATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAGGGGCTTCTCGATTATTACGTCAATTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCATGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTGGAGCAGGACACATATAACGTCCGGATTATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTTGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAACA
ATCAGCGCGTGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAGATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.461	100	0.825
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568