Detailed information NTG0204963

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: BLL65_RS01385
• Genome accession: NZ_CP018007
• Coordinates: 282012..283157 (-)
• Length: 381 a.a.
• NCBI ID: WP_074534220.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain sx01604
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 277012..288157

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BLL65_RS01365 (BLL65_01360)	-	277295..277728 (+)	434	Protein_276	hypothetical protein	-
BLL65_RS01370 (BLL65_01365)	-	277753..279825 (-)	2073	WP_032875881.1	transglycosylase domain-containing protein	-
BLL65_RS01375 (BLL65_01370)	speE	280025..280855 (+)	831	WP_003151052.1	spermidine synthase	-
BLL65_RS01380 (BLL65_01375)	speB	280914..281786 (+)	873	WP_032875884.1	agmatinase	-
BLL65_RS19485	-	281909..282028 (-)	120	WP_017418707.1	PhrC/PhrF family phosphatase-inhibitory pheromone	-
BLL65_RS01385 (BLL65_01380)	rapF	282012..283157 (-)	1146	WP_074534220.1	Rap family tetratricopeptide repeat protein	Regulator
BLL65_RS01395 (BLL65_01385)	-	283388..284743 (+)	1356	WP_032875887.1	YncE family protein	-
BLL65_RS01400 (BLL65_01390)	-	284783..286159 (+)	1377	WP_032875890.1	YncE family protein	-
BLL65_RS01405 (BLL65_01395)	-	286166..286678 (-)	513	Protein_284	bacteriocin biosynthesis protein AlbG	-
BLL65_RS01410 (BLL65_01400)	-	286832..287260 (+)	429	WP_032869448.1	DUF1934 domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45737.21 Da
• Isoelectric Point: 5.0614

>NTDB_id=204963 BLL65_RS01385 WP_074534220.1 282012..283157(-) (rapF) [Bacillus velezensis strain sx01604]
MASVLSSSAVGEKINEWYMYIRRFSIPDAEYLRREIKEELAGLEDDQDLHLYYSLMEFRHNLMLEYLEPLESQRIEEQPR
LSDLLADIDKKQARLTGRLDYYFNFFRGMYELECREYLSAIQFFKKAESKLTYVKDHIEKAEFYFKMSEVYYYMKQTYVS
MDYARQAYLIYKDAEKYNIRLTQCHSLFGANYLDVKQYDHAISHFQKAYTMAELEQQPQLMGRTLFNIALCHNNQNNKVE
AIPHLKEAIAVFEKAQMSHSLPQPYFLLTQIYFKLKNIDNAYDYHKKGISICKEIDDIIYEEKFKFLEYLYMPDPRDTLI
NDCLHFLENKLMYADIEELALDVAKYYYTQEEYKKASVYFLKVEEARQQIEGGVNLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=204963 BLL65_RS01385 WP_074534220.1 282012..283157(-) (rapF) [Bacillus velezensis strain sx01604]
GTGGCGAGTGTTTTATCATCTTCAGCGGTTGGAGAAAAAATCAACGAATGGTATATGTACATTCGAAGGTTCAGCATCCC
GGACGCCGAGTACTTGCGGAGAGAAATCAAAGAAGAACTTGCAGGTCTGGAAGATGATCAGGATCTTCATCTATACTATT
CTCTCATGGAATTCCGTCACAATCTGATGCTCGAATACCTCGAACCGCTGGAATCGCAGCGGATAGAAGAACAGCCGAGA
CTATCGGATCTGCTCGCGGATATTGATAAAAAGCAGGCCCGGCTGACCGGACGTCTTGATTATTATTTTAATTTTTTCCG
GGGGATGTATGAGCTGGAATGCCGTGAATATCTTTCAGCGATTCAGTTTTTTAAGAAAGCTGAAAGCAAACTGACGTACG
TTAAAGATCATATAGAAAAAGCTGAATTTTACTTTAAAATGTCAGAAGTCTATTATTATATGAAACAAACTTATGTATCG
ATGGATTATGCGCGGCAGGCTTATTTAATTTATAAAGATGCAGAAAAATATAATATTAGATTAACCCAGTGCCATTCTTT
ATTTGGGGCTAATTATCTTGATGTAAAGCAATACGATCACGCGATTTCCCACTTTCAAAAGGCATATACGATGGCTGAAT
TGGAGCAGCAGCCGCAATTAATGGGGAGGACACTTTTTAACATCGCTTTATGCCATAATAATCAAAACAATAAAGTCGAG
GCTATTCCCCATTTAAAAGAAGCCATAGCTGTTTTTGAAAAAGCTCAAATGAGTCATTCACTTCCGCAGCCCTACTTCTT
ACTTACACAGATTTATTTTAAGTTAAAAAATATAGATAACGCGTACGATTATCATAAAAAAGGTATCTCAATATGTAAGG
AAATAGATGATATAATTTACGAGGAAAAATTTAAATTTTTAGAATACTTGTATATGCCGGATCCAAGAGATACATTAATA
AACGATTGTCTGCATTTTCTTGAAAATAAATTGATGTATGCTGATATTGAGGAATTAGCCCTTGATGTAGCTAAATATTA
TTACACACAAGAAGAATATAAAAAAGCTTCTGTCTACTTTTTAAAGGTTGAAGAAGCCAGACAGCAGATCGAAGGAGGAG
TGAATTTATATGAAATTGAAGTATAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

• Tetratricopeptide repeat (TPR_12) (188-254)

• Tetratricopeptide repeat (TPR_8) (265-293)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	70.079	100	0.701
rapC	Bacillus subtilis subsp. subtilis str. 168	54.211	99.738	0.541