Detailed information    

insolico Bioinformatically predicted

Overview


Name   sxy/tfoX   Type   Regulator
Locus tag   WM95_RS09060 Genome accession   NZ_CP017990
Coordinates   1845916..1846542 (+) Length   208 a.a.
NCBI ID   WP_023311030.1    Uniprot ID   A0A1Z3N2L7
Organism   Enterobacter cloacae complex sp. ECNIH7     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context


Location: 1840916..1851542
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WM95_RS09040 (WM95_08840) - 1841316..1843076 (-) 1761 WP_063408014.1 Lon protease family protein -
  WM95_RS09045 (WM95_08845) matP 1843263..1843715 (+) 453 WP_008499929.1 macrodomain Ter protein MatP -
  WM95_RS09050 (WM95_08850) ompA 1843779..1844834 (-) 1056 WP_023311028.1 porin OmpA -
  WM95_RS09055 (WM95_08855) sulA 1845189..1845698 (-) 510 WP_032668147.1 SOS-induced cell division inhibitor SulA -
  WM95_RS09060 (WM95_08860) sxy/tfoX 1845916..1846542 (+) 627 WP_023311030.1 TfoX/Sxy family DNA transformation protein Regulator
  WM95_RS09065 (WM95_08865) yccS 1846499..1848661 (-) 2163 WP_063408013.1 YccS family putative transporter -
  WM95_RS09070 (WM95_08870) - 1848681..1849127 (-) 447 WP_023311032.1 YccF domain-containing protein -
  WM95_RS09075 (WM95_08875) helD 1849251..1851305 (+) 2055 WP_088544749.1 DNA helicase IV -

Sequence


Protein


Download         Length: 208 a.a.        Molecular weight: 23906.46 Da        Isoelectric Point: 9.4588

>NTDB_id=204869 WM95_RS09060 WP_023311030.1 1845916..1846542(+) (sxy/tfoX) [Enterobacter cloacae complex sp. ECNIH7]
MKKISYERIYKSQEYLSPLGEIHHRALFGGYTLAVDDAVFAMVSDGELYLRACEESAKYCVKNASSFLTLMKRGRPVLLN
YYRVDDGLWQDRERLLQLSSFALSAARKERYQRHQRNRLKDLPNLTFQLEVLLFEAGITNEETLRALGARASWLKMRAKN
KALSIKVLFALEGAIEGLHEAALPAGIRRELTEWFNALPEPQENHSSR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=204869 WM95_RS09060 WP_023311030.1 1845916..1846542(+) (sxy/tfoX) [Enterobacter cloacae complex sp. ECNIH7]
ATGAAAAAGATATCTTATGAACGGATTTATAAATCCCAGGAATACCTCTCCCCGTTGGGCGAGATTCATCATCGCGCGCT
GTTTGGAGGCTATACCCTGGCGGTGGATGATGCGGTTTTTGCCATGGTGTCAGACGGAGAGCTTTATCTTCGCGCCTGTG
AGGAGAGTGCGAAATACTGTGTAAAAAATGCCTCCTCTTTTTTAACGTTGATGAAGCGAGGCCGCCCGGTGCTGCTCAAC
TATTATCGTGTGGATGATGGATTATGGCAGGACAGGGAGCGGTTGCTTCAGCTCTCCTCGTTTGCGCTCAGTGCGGCAAG
AAAAGAACGCTATCAGCGCCATCAACGAAACCGACTTAAGGATCTGCCAAACCTGACCTTTCAACTTGAAGTCTTGCTCT
TTGAAGCTGGCATTACCAATGAGGAAACGCTGCGGGCGCTGGGTGCAAGAGCGAGCTGGCTAAAGATGCGGGCAAAAAAC
AAAGCGCTCAGTATTAAAGTTCTCTTCGCGCTGGAAGGGGCTATCGAGGGGCTGCATGAGGCGGCACTCCCGGCAGGCAT
TCGCCGGGAGCTAACGGAGTGGTTTAATGCGCTGCCTGAGCCACAGGAGAATCACTCCTCCAGGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A1Z3N2L7

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.128

97.596

0.567


Multiple sequence alignment