Detailed information
Bioinformatically predicted
Overview
| Name | fimT | Type | Machinery gene |
| Locus tag | Aba9201_RS16820 | Genome accession | NZ_CP023020 |
| Coordinates | 3420328..3420843 (-) | Length | 171 a.a. |
| NCBI ID | WP_000477151.1 | Uniprot ID | V5VA61 |
| Organism | Acinetobacter baumannii strain 9201 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3415328..3425843
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Aba9201_RS16795 (Aba9201_16770) | - | 3415875..3417518 (+) | 1644 | WP_000281764.1 | nitrite/sulfite reductase | - |
| Aba9201_RS16800 (Aba9201_16775) | - | 3417511..3417996 (+) | 486 | WP_000935247.1 | DUF934 domain-containing protein | - |
| Aba9201_RS16805 (Aba9201_16780) | - | 3418078..3418431 (+) | 354 | WP_000457786.1 | DMT family transporter | - |
| Aba9201_RS16810 (Aba9201_16785) | - | 3418474..3418917 (-) | 444 | WP_001176580.1 | VOC family protein | - |
| Aba9201_RS16815 (Aba9201_16790) | - | 3419044..3420219 (-) | 1176 | WP_000129964.1 | thiolase family protein | - |
| Aba9201_RS16820 (Aba9201_16795) | fimT | 3420328..3420843 (-) | 516 | WP_000477151.1 | GspH/FimT family pseudopilin | Machinery gene |
| Aba9201_RS16825 (Aba9201_16800) | omp38 | 3421225..3422295 (+) | 1071 | WP_000777880.1 | outer membrane protein Omp38 | - |
| Aba9201_RS20810 | - | 3422420..3422578 (-) | 159 | WP_000692859.1 | hypothetical protein | - |
| Aba9201_RS16835 (Aba9201_16810) | - | 3422582..3423787 (-) | 1206 | WP_000354412.1 | RtcB family protein | - |
| Aba9201_RS16840 (Aba9201_16815) | - | 3424064..3425524 (-) | 1461 | WP_000004971.1 | amino acid permease | - |
Sequence
Protein
Download Length: 171 a.a. Molecular weight: 19606.86 Da Isoelectric Point: 8.8196
>NTDB_id=204790 Aba9201_RS16820 WP_000477151.1 3420328..3420843(-) (fimT) [Acinetobacter baumannii strain 9201]
MFKSPGFTIVELTITLVILVIMSVIAIPLYHQFMASVELKNTPRILTIHIQKAKYDAIIRHKNVVLCPSSDQLVCNTNWD
NRVISFVDNNRNLQHDLNEELLTSIDLNHHYGSMKLQRFGKKQNSIIFQGSSGLPIESNGSFIYCSYDQLKNFKLILSKM
GHVRLEELKNC
MFKSPGFTIVELTITLVILVIMSVIAIPLYHQFMASVELKNTPRILTIHIQKAKYDAIIRHKNVVLCPSSDQLVCNTNWD
NRVISFVDNNRNLQHDLNEELLTSIDLNHHYGSMKLQRFGKKQNSIIFQGSSGLPIESNGSFIYCSYDQLKNFKLILSKM
GHVRLEELKNC
Nucleotide
Download Length: 516 bp
>NTDB_id=204790 Aba9201_RS16820 WP_000477151.1 3420328..3420843(-) (fimT) [Acinetobacter baumannii strain 9201]
ATGTTTAAATCTCCTGGTTTTACTATAGTTGAGCTCACTATAACACTCGTAATTCTTGTGATTATGTCAGTTATAGCCAT
TCCTTTATACCATCAATTTATGGCATCTGTAGAACTAAAAAATACGCCGCGTATACTCACAATTCATATACAAAAAGCCA
AATATGACGCAATTATTAGGCATAAGAATGTTGTTCTTTGTCCAAGTTCTGATCAATTGGTCTGCAATACGAATTGGGAT
AACCGCGTAATCAGCTTTGTAGATAATAACCGTAATCTACAACATGATTTAAATGAAGAATTATTGACCTCTATAGATCT
TAACCATCACTACGGTTCTATGAAATTACAACGTTTTGGAAAAAAACAAAATAGTATTATTTTTCAAGGTAGTTCTGGAC
TACCCATCGAGTCGAATGGCAGTTTTATCTATTGTTCTTATGACCAGCTTAAAAACTTTAAATTAATTCTTAGCAAAATG
GGACATGTGCGCTTAGAAGAGCTTAAAAATTGTTAG
ATGTTTAAATCTCCTGGTTTTACTATAGTTGAGCTCACTATAACACTCGTAATTCTTGTGATTATGTCAGTTATAGCCAT
TCCTTTATACCATCAATTTATGGCATCTGTAGAACTAAAAAATACGCCGCGTATACTCACAATTCATATACAAAAAGCCA
AATATGACGCAATTATTAGGCATAAGAATGTTGTTCTTTGTCCAAGTTCTGATCAATTGGTCTGCAATACGAATTGGGAT
AACCGCGTAATCAGCTTTGTAGATAATAACCGTAATCTACAACATGATTTAAATGAAGAATTATTGACCTCTATAGATCT
TAACCATCACTACGGTTCTATGAAATTACAACGTTTTGGAAAAAAACAAAATAGTATTATTTTTCAAGGTAGTTCTGGAC
TACCCATCGAGTCGAATGGCAGTTTTATCTATTGTTCTTATGACCAGCTTAAAAACTTTAAATTAATTCTTAGCAAAATG
GGACATGTGCGCTTAGAAGAGCTTAAAAATTGTTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| fimT | Acinetobacter baylyi ADP1 |
43.976 |
97.076 |
0.427 |