Detailed information
Bioinformatically predicted
Overview
| Name | pilV | Type | Machinery gene |
| Locus tag | BMR72_RS25525 | Genome accession | NZ_CP017969 |
| Coordinates | 5286639..5287196 (+) | Length | 185 a.a. |
| NCBI ID | WP_003110422.1 | Uniprot ID | - |
| Organism | Pseudomonas aeruginosa isolate B10W | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 5281639..5292196
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BMR72_RS25505 (BMR72_24630) | pilR | 5282915..5284252 (+) | 1338 | WP_003110427.1 | two-component system response regulator PilR | Regulator |
| BMR72_RS25510 (BMR72_24635) | thiO | 5284298..5285392 (-) | 1095 | WP_003134931.1 | glycine oxidase ThiO | - |
| BMR72_RS25515 (BMR72_24640) | - | 5285527..5286036 (+) | 510 | WP_003134932.1 | GspH/FimT family pseudopilin | - |
| BMR72_RS25520 (BMR72_24645) | - | 5286142..5286648 (+) | 507 | WP_003134935.1 | GspH/FimT family pseudopilin | - |
| BMR72_RS25525 (BMR72_24650) | pilV | 5286639..5287196 (+) | 558 | WP_003110422.1 | type 4a pilus minor pilin PilV | Machinery gene |
| BMR72_RS25530 (BMR72_24655) | pilW | 5287193..5288017 (+) | 825 | WP_003119422.1 | type 4a pilus minor pilin PilW | - |
| BMR72_RS25535 (BMR72_24660) | pilX | 5288014..5288601 (+) | 588 | WP_003094700.1 | type 4a pilus minor pilin PilX | - |
| BMR72_RS25540 (BMR72_24665) | pilY1 | 5288613..5292098 (+) | 3486 | WP_003134937.1 | type 4a pilus biogenesis protein PilY1 | - |
Sequence
Protein
Download Length: 185 a.a. Molecular weight: 20072.23 Da Isoelectric Point: 7.9204
>NTDB_id=204616 BMR72_RS25525 WP_003110422.1 5286639..5287196(+) (pilV) [Pseudomonas aeruginosa isolate B10W]
MLLKSRHKPLYQSGFSMIEVLVALLLISIGVLGMIAMQGKTIQYTADSVERNKAAMLGSNLLESMRASPKALYDVKDQMA
TQSDFFKAKGSAFPTAPSSCTPLPDAIKDRLGCWAEQVKNELPGAGDLLMSDYYICRSSKPGDCDGKGSMLEIRLAWRGK
QGACVNAADSSADTSLCYYTLRVEP
MLLKSRHKPLYQSGFSMIEVLVALLLISIGVLGMIAMQGKTIQYTADSVERNKAAMLGSNLLESMRASPKALYDVKDQMA
TQSDFFKAKGSAFPTAPSSCTPLPDAIKDRLGCWAEQVKNELPGAGDLLMSDYYICRSSKPGDCDGKGSMLEIRLAWRGK
QGACVNAADSSADTSLCYYTLRVEP
Nucleotide
Download Length: 558 bp
>NTDB_id=204616 BMR72_RS25525 WP_003110422.1 5286639..5287196(+) (pilV) [Pseudomonas aeruginosa isolate B10W]
ATGCTATTGAAATCGCGGCACAAGCCGCTGTACCAATCCGGCTTCAGCATGATCGAAGTGCTGGTCGCCCTGCTGCTGAT
CAGCATCGGCGTGCTGGGCATGATCGCCATGCAGGGCAAGACCATCCAGTACACCGCCGACTCGGTCGAGCGCAACAAGG
CAGCCATGCTCGGCAGCAACCTGCTGGAAAGCATGCGGGCGAGCCCGAAGGCGCTGTACGACGTCAAGGACCAGATGGCC
ACGCAATCCGACTTCTTCAAGGCCAAGGGGTCGGCGTTCCCCACCGCGCCGTCCTCCTGCACGCCATTGCCCGACGCGAT
CAAGGACCGCCTGGGATGCTGGGCGGAACAGGTGAAGAACGAACTGCCAGGCGCTGGCGACCTGCTGATGAGCGACTACT
ACATCTGCCGCAGCTCGAAGCCGGGCGACTGCGACGGCAAGGGCTCCATGCTGGAAATCCGCCTGGCCTGGCGCGGCAAG
CAAGGCGCCTGCGTCAACGCCGCCGACAGCAGCGCCGACACCTCCCTCTGCTACTACACCCTCAGGGTTGAGCCATGA
ATGCTATTGAAATCGCGGCACAAGCCGCTGTACCAATCCGGCTTCAGCATGATCGAAGTGCTGGTCGCCCTGCTGCTGAT
CAGCATCGGCGTGCTGGGCATGATCGCCATGCAGGGCAAGACCATCCAGTACACCGCCGACTCGGTCGAGCGCAACAAGG
CAGCCATGCTCGGCAGCAACCTGCTGGAAAGCATGCGGGCGAGCCCGAAGGCGCTGTACGACGTCAAGGACCAGATGGCC
ACGCAATCCGACTTCTTCAAGGCCAAGGGGTCGGCGTTCCCCACCGCGCCGTCCTCCTGCACGCCATTGCCCGACGCGAT
CAAGGACCGCCTGGGATGCTGGGCGGAACAGGTGAAGAACGAACTGCCAGGCGCTGGCGACCTGCTGATGAGCGACTACT
ACATCTGCCGCAGCTCGAAGCCGGGCGACTGCGACGGCAAGGGCTCCATGCTGGAAATCCGCCTGGCCTGGCGCGGCAAG
CAAGGCGCCTGCGTCAACGCCGCCGACAGCAGCGCCGACACCTCCCTCTGCTACTACACCCTCAGGGTTGAGCCATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilV | Pseudomonas aeruginosa PAK |
98.378 |
100 |
0.984 |