Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   CGP88_RS03320 Genome accession   NZ_CP022910
Coordinates   665433..666107 (+) Length   224 a.a.
NCBI ID   WP_115285372.1    Uniprot ID   -
Organism   Staphylococcus aureus strain 164     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 660433..671107
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CGP88_RS03290 (CGP88_00588) - 660648..661715 (+) 1068 WP_000980137.1 membrane protein -
  CGP88_RS03295 (CGP88_00589) - 661866..662909 (+) 1044 WP_001030771.1 alpha/beta hydrolase -
  CGP88_RS03305 (CGP88_00590) - 663238..663666 (+) 429 WP_000198504.1 hypothetical protein -
  CGP88_RS03310 (CGP88_00591) - 663875..664381 (-) 507 WP_000940134.1 GNAT family N-acetyltransferase -
  CGP88_RS03315 (CGP88_00592) graX 664494..665417 (+) 924 WP_000802946.1 auxiliary protein GraX/ApsX -
  CGP88_RS03320 (CGP88_00593) braR 665433..666107 (+) 675 WP_115285372.1 response regulator transcription factor GraR/ApsR Regulator
  CGP88_RS03325 (CGP88_00594) graS 666100..667140 (+) 1041 WP_001061252.1 histidine kinase GraS/ApsS -
  CGP88_RS03330 (CGP88_00595) vraF 667284..668045 (+) 762 WP_000985996.1 ABC transporter ATP-binding protein VraF -
  CGP88_RS03335 (CGP88_00596) vraG 668035..669924 (+) 1890 WP_000143623.1 ABC transporter permease VraG -

Sequence

Protein


Download         Length: 224 a.a.        Molecular weight: 26090.97 Da        Isoelectric Point: 4.3968

>NTDB_id=204486 CGP88_RS03320 WP_115285372.1 665433..666107(+) (braR) [Staphylococcus aureus strain 164]
MQILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFESFNPEIVILDVQLPKYDGFYWCRKMREVSNVPILFLSSR
DNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFIAEEKRTLTWQDAVVDLSKDSIQKGDQTIFLSKTEMIIL
EILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEISMDSAIETKVGKGYMAHE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=204486 CGP88_RS03320 WP_115285372.1 665433..666107(+) (braR) [Staphylococcus aureus strain 164]
ATGCAAATACTACTAGTAGAAGATGACAATACTTTGTTTCAAGAATTGAAAAAAGAATTAGAACAATGGGATTTTAATGT
TGCTGGTATTGAAGATTTCGGCAAAGTAATGGATACATTTGAAAGTTTTAATCCTGAAATTGTTATATTGGATGTTCAAT
TACCTAAATATGATGGGTTTTATTGGTGCAGAAAAATGAGAGAAGTTTCCAACGTACCAATATTATTTTTATCATCTCGT
GATAATCCAATGGATCAAGTGATGAGTATGGAACTTGGCGCAGATGATTATATGCAAAAACCGTTCTATACCAATGTATT
AATTGCTAAATTACAAGCGATTTATCGTCGTGTCTATGAGTTTATAGCTGAAGAAAAACGTACATTGACTTGGCAAGATG
CTGTCGTTGATCTATCAAAAGATAGTATACAAAAAGGTGATCAGACGATTTTCCTGTCCAAAACAGAAATGATTATATTA
GAAATTCTTATTACCAAAAAAAATCAAATCGTTTCGAGAGATACAATTATCACTGCATTATGGGATGATGAAGCATTTGT
TAGTGATAATACGTTAACAGTAAATGTGAATCGTTTACGAAAAAAATTATCTGAAATTAGTATGGATAGTGCAATCGAAA
CAAAAGTAGGAAAAGGATATATGGCTCATGAATAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(148-221)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

41.629

98.661

0.411