Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   BMF34_RS10275 Genome accession   NZ_CP017952
Coordinates   2097640..2098413 (+) Length   257 a.a.
NCBI ID   WP_016356271.1    Uniprot ID   A0A3L8GC69
Organism   Streptococcus iniae strain 89353     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2092640..2103413
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BMF34_RS10630 - 2093952..2094068 (-) 117 Protein_1924 IS30 family transposase -
  BMF34_RS10260 (BMF34_10165) rlmH 2094412..2094891 (-) 480 WP_003100536.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  BMF34_RS10265 (BMF34_10170) - 2095032..2096207 (+) 1176 WP_003099060.1 IS256 family transposase -
  BMF34_RS10270 (BMF34_10175) htrA 2096359..2097561 (+) 1203 WP_016356270.1 S1C family serine protease Regulator
  BMF34_RS10275 (BMF34_10180) spo0J 2097640..2098413 (+) 774 WP_016356271.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 257 a.a.        Molecular weight: 29021.40 Da        Isoelectric Point: 9.9391

>NTDB_id=204362 BMF34_RS10275 WP_016356271.1 2097640..2098413(+) (spo0J) [Streptococcus iniae strain 89353]
MTETYKKIAIKDIVANPYQPRLHFNEDELKELAASISLNGLIQPIIVRKSEVFGYELIAGERRLRASQIAGLTEIPAIIK
TISNSESMNQAIIENLQRSNLNPIEEAKAFQSIIDKNQLTHDQLAAYMGKSRPYITNTIRLLQLSTSVLDAIEKKTISSG
HARSLLALSTKEEQDKYLNYIISQNLNVRQTESLIRKSKVKKEKKKEKTLFTKAIENELAKSLGLAVSISLNKDGSGQCH
FTFHNDDELNRIINKLK

Nucleotide


Download         Length: 774 bp        

>NTDB_id=204362 BMF34_RS10275 WP_016356271.1 2097640..2098413(+) (spo0J) [Streptococcus iniae strain 89353]
ATGACAGAAACATATAAAAAAATAGCCATTAAAGATATTGTTGCTAATCCTTATCAACCAAGATTACATTTTAATGAAGA
TGAGTTAAAAGAATTAGCAGCATCAATTTCTTTAAATGGTTTAATTCAGCCAATTATCGTCCGTAAATCTGAAGTCTTTG
GTTATGAATTAATTGCTGGTGAAAGAAGATTAAGAGCTTCTCAAATAGCAGGTTTAACTGAAATACCTGCTATTATCAAA
ACTATTTCTAATAGTGAGAGTATGAATCAAGCTATTATTGAAAATTTACAACGTTCCAATTTAAATCCAATAGAAGAAGC
TAAAGCTTTTCAAAGTATTATTGATAAAAATCAATTAACCCATGATCAATTAGCAGCATATATGGGGAAATCTAGACCTT
ATATTACAAATACAATTAGACTCTTACAATTATCCACATCTGTTCTAGATGCCATTGAAAAAAAGACAATAAGTTCTGGC
CACGCACGCAGCCTTCTAGCACTCTCAACTAAGGAAGAACAAGATAAATATCTTAATTATATTATCAGTCAAAACTTAAA
TGTTCGACAAACAGAATCTCTTATTCGAAAGAGTAAGGTTAAAAAAGAAAAGAAAAAAGAAAAGACACTTTTTACAAAAG
CTATTGAAAATGAGCTTGCTAAATCACTTGGACTAGCAGTTTCAATTTCCTTAAACAAAGATGGTAGTGGGCAGTGTCAT
TTTACTTTTCACAACGACGACGAATTAAACAGAATTATCAATAAGCTAAAATAA

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(147-197)

ParB/Sulfiredoxin domain (ParB_N)

(7-95)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A3L8GC69

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

56.25

99.611

0.56

Multiple sequence alignment