Detailed information NTG0204289

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: BMU11_RS13240
• Genome accession: NZ_CP017938
• Coordinates: 2717691..2718506 (+)
• Length: 271 a.a.
• NCBI ID: WP_078220749.1
• Uniprot ID: -
• Organism: Acinetobacter pittii strain YMC2010/8/T346
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2712691..2723506

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BMU11_RS13205 (BMU11_12800)	kdsB	2713217..2713978 (+)	762	WP_014206593.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
BMU11_RS13210 (BMU11_12805)	holB	2713992..2714972 (+)	981	WP_078220747.1	hypothetical protein	-
BMU11_RS13215 (BMU11_12810)	pilZ	2714983..2715324 (+)	342	WP_002121335.1	PilZ domain-containing protein	-
BMU11_RS13220 (BMU11_12815)	ycfH	2715342..2716115 (+)	774	WP_017399499.1	TatD family hydrolase	-
BMU11_RS13225 (BMU11_12820)	-	2716152..2716760 (+)	609	WP_057085321.1	TetR/AcrR family transcriptional regulator	-
BMU11_RS13230 (BMU11_12825)	-	2716767..2717321 (+)	555	WP_005069534.1	type II secretion system protein	-
BMU11_RS13235 (BMU11_12830)	xcpV	2717311..2717691 (+)	381	WP_078220748.1	type II secretion system minor pseudopilin GspI	Machinery gene
BMU11_RS13240 (BMU11_12835)	xcpW	2717691..2718506 (+)	816	WP_078220749.1	type II secretion system minor pseudopilin GspJ	Machinery gene
BMU11_RS13245 (BMU11_12840)	gspK	2718507..2719466 (+)	960	WP_078220750.1	type II secretion system minor pseudopilin GspK	-
BMU11_RS13250 (BMU11_12845)	-	2719696..2720292 (+)	597	WP_002121363.1	6-pyruvoyl trahydropterin synthase family protein	-
BMU11_RS13255 (BMU11_12850)	ung	2720346..2721059 (+)	714	WP_005069527.1	uracil-DNA glycosylase	-
BMU11_RS13260 (BMU11_12855)	hibch	2721056..2722180 (+)	1125	WP_075382888.1	enoyl-CoA hydratase/isomerase family protein	-
BMU11_RS13265 (BMU11_12860)	tadA	2722186..2722686 (+)	501	WP_078220751.1	tRNA adenosine(34) deaminase TadA	-
BMU11_RS13270 (BMU11_12865)	-	2722761..2723201 (+)	441	WP_014206600.1	SRPBCC family protein	-

Sequence

Protein

• Length: 271 a.a.
• Molecular weight: 30693.23 Da
• Isoelectric Point: 9.6167

>NTDB_id=204289 BMU11_RS13240 WP_078220749.1 2717691..2718506(+) (xcpW) [Acinetobacter pittii strain YMC2010/8/T346]
MIKNKSFCSPSSASCLAVRSEQMMRGYSVQSSSSCAQAKLCFKDSHTRNIVSHLATRSSSARLTRASGFTLVELLVAIAI
FAILSLLGWKVFDYLLKVRDRNTQHEVQLFELQDAYQQVLRDTLQIIPLSANQGGQLRPALEIDNQVLRFSKAGVTDPLK
QGLSPFERIEYRYDPDQKKLYRLKYSNLNTSNREQPLSSTLLSQVEQFQIMVLTPQEVTKWPEINLDPTKPEEFRKLPKG
IKIQLTVAGISYEWIYSLNQGDLSLSKQGGQ

Nucleotide

• Length: 816 bp

>NTDB_id=204289 BMU11_RS13240 WP_078220749.1 2717691..2718506(+) (xcpW) [Acinetobacter pittii strain YMC2010/8/T346]
ATGATAAAGAATAAAAGTTTTTGTTCTCCAAGCTCAGCTTCATGTCTTGCGGTACGATCGGAGCAGATGATGAGGGGTTA
CTCCGTGCAAAGTTCTTCGTCTTGCGCTCAGGCAAAGCTTTGCTTTAAAGACTCTCACACTCGAAACATAGTTTCTCATC
TTGCGACACGATCGAGCAGTGCTCGATTAACTCGTGCCTCAGGATTTACTTTAGTTGAGCTTTTAGTTGCAATTGCAATT
TTTGCTATTTTATCTTTGTTGGGTTGGAAGGTTTTTGACTATTTATTAAAAGTTCGCGATCGTAATACTCAACATGAAGT
GCAGCTATTTGAATTACAAGATGCTTATCAACAAGTTTTGCGTGATACATTGCAAATTATACCTTTATCAGCCAATCAAG
GCGGGCAATTACGTCCAGCTTTAGAGATTGATAATCAAGTTCTCCGCTTTAGTAAGGCGGGTGTTACTGATCCATTAAAG
CAAGGATTATCACCTTTTGAGCGTATTGAATATCGATATGATCCTGATCAAAAAAAGCTTTATCGTCTTAAATATAGTAA
TTTAAATACTTCAAATAGAGAGCAGCCCTTATCAAGTACACTGTTGAGCCAAGTTGAACAATTTCAAATTATGGTGTTGA
CACCGCAAGAAGTAACAAAGTGGCCAGAAATTAATCTTGATCCTACAAAACCTGAAGAATTTAGAAAGTTACCAAAAGGA
ATAAAAATACAACTCACGGTTGCAGGTATAAGTTATGAGTGGATTTATAGCTTAAACCAAGGGGACTTATCGCTCTCCAA
ACAGGGAGGTCAATAA

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein J (T2SSJ) (121-250)

• Prokaryotic N-terminal methylation motif (N_methyl) (65-87)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	88	83.026	0.731