Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | BMU11_RS13235 | Genome accession | NZ_CP017938 |
| Coordinates | 2717311..2717691 (+) | Length | 126 a.a. |
| NCBI ID | WP_078220748.1 | Uniprot ID | - |
| Organism | Acinetobacter pittii strain YMC2010/8/T346 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2712311..2722691
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BMU11_RS13205 (BMU11_12800) | kdsB | 2713217..2713978 (+) | 762 | WP_014206593.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| BMU11_RS13210 (BMU11_12805) | holB | 2713992..2714972 (+) | 981 | WP_078220747.1 | hypothetical protein | - |
| BMU11_RS13215 (BMU11_12810) | pilZ | 2714983..2715324 (+) | 342 | WP_002121335.1 | PilZ domain-containing protein | - |
| BMU11_RS13220 (BMU11_12815) | ycfH | 2715342..2716115 (+) | 774 | WP_017399499.1 | TatD family hydrolase | - |
| BMU11_RS13225 (BMU11_12820) | - | 2716152..2716760 (+) | 609 | WP_057085321.1 | TetR/AcrR family transcriptional regulator | - |
| BMU11_RS13230 (BMU11_12825) | - | 2716767..2717321 (+) | 555 | WP_005069534.1 | type II secretion system protein | - |
| BMU11_RS13235 (BMU11_12830) | xcpV | 2717311..2717691 (+) | 381 | WP_078220748.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| BMU11_RS13240 (BMU11_12835) | xcpW | 2717691..2718506 (+) | 816 | WP_078220749.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| BMU11_RS13245 (BMU11_12840) | gspK | 2718507..2719466 (+) | 960 | WP_078220750.1 | type II secretion system minor pseudopilin GspK | - |
| BMU11_RS13250 (BMU11_12845) | - | 2719696..2720292 (+) | 597 | WP_002121363.1 | 6-pyruvoyl trahydropterin synthase family protein | - |
| BMU11_RS13255 (BMU11_12850) | ung | 2720346..2721059 (+) | 714 | WP_005069527.1 | uracil-DNA glycosylase | - |
| BMU11_RS13260 (BMU11_12855) | hibch | 2721056..2722180 (+) | 1125 | WP_075382888.1 | enoyl-CoA hydratase/isomerase family protein | - |
| BMU11_RS13265 (BMU11_12860) | tadA | 2722186..2722686 (+) | 501 | WP_078220751.1 | tRNA adenosine(34) deaminase TadA | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13934.09 Da Isoelectric Point: 9.4463
>NTDB_id=204288 BMU11_RS13235 WP_078220748.1 2717311..2717691(+) (xcpV) [Acinetobacter pittii strain YMC2010/8/T346]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEIALMEINQEWLEGTQSKQITSQGETWQI
DKSAQSTISPNVQKVDVQVSLYDSDKGKAQNGITHLVFFNYPMKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEIALMEINQEWLEGTQSKQITSQGETWQI
DKSAQSTISPNVQKVDVQVSLYDSDKGKAQNGITHLVFFNYPMKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=204288 BMU11_RS13235 WP_078220748.1 2717311..2717691(+) (xcpV) [Acinetobacter pittii strain YMC2010/8/T346]
ATGAAATCTAAAGGCTTTACTCTATTAGAAGTAATGGTTGCTTTAGCAATTTTTGCAGTGGCGGCTGTCGCGTTAACTAA
AGTAGCCATGCAATATACTCAATCTACCTCAAATGCAATTCTTAGAACAAAAGCTCAGTTTGTAGCAATGAATGAAATTG
CTTTAATGGAGATAAATCAGGAATGGCTTGAAGGTACTCAAAGTAAGCAAATTACTTCTCAAGGCGAAACTTGGCAGATT
GACAAATCTGCACAATCTACAATTAGCCCGAATGTTCAGAAAGTAGATGTACAAGTTAGCTTATATGATTCTGATAAGGG
CAAAGCTCAAAATGGTATTACTCACTTGGTATTTTTTAATTATCCAATGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACTCTATTAGAAGTAATGGTTGCTTTAGCAATTTTTGCAGTGGCGGCTGTCGCGTTAACTAA
AGTAGCCATGCAATATACTCAATCTACCTCAAATGCAATTCTTAGAACAAAAGCTCAGTTTGTAGCAATGAATGAAATTG
CTTTAATGGAGATAAATCAGGAATGGCTTGAAGGTACTCAAAGTAAGCAAATTACTTCTCAAGGCGAAACTTGGCAGATT
GACAAATCTGCACAATCTACAATTAGCCCGAATGTTCAGAAAGTAGATGTACAAGTTAGCTTATATGATTCTGATAAGGG
CAAAGCTCAAAATGGTATTACTCACTTGGTATTTTTTAATTATCCAATGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
92.063 |
100 |
0.921 |