Detailed information NTG0204097

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: K09K1_RS15450
• Genome accession: NZ_CP017919
• Coordinates: 1438885..1439913 (+)
• Length: 342 a.a.
• NCBI ID: WP_418369043.1
• Uniprot ID: -
• Organism: Vibrio alginolyticus strain K09K1
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 1433885..1444913

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K09K1_RS15425 (K09K1_30620)	rplC	1434450..1435079 (-)	630	WP_005379555.1	50S ribosomal protein L3	-
K09K1_RS15430 (K09K1_30630)	rpsJ	1435094..1435405 (-)	312	WP_004410492.1	30S ribosomal protein S10	-
K09K1_RS15435 (K09K1_30640)	rpmE	1435862..1436083 (-)	222	WP_005379546.1	50S ribosomal protein L31	-
K09K1_RS15445 (K09K1_30650)	priA	1436380..1438581 (+)	2202	WP_086046495.1	primosomal protein N'	-
K09K1_RS15450 (K09K1_30660)	cytR	1438885..1439913 (+)	1029	WP_418369043.1	DNA-binding transcriptional regulator CytR	Regulator
K09K1_RS15455 (K09K1_30680)	ftsN	1440138..1440686 (+)	549	WP_017820300.1	cell division protein FtsN	-
K09K1_RS15460 (K09K1_30690)	hslV	1440802..1441353 (+)	552	WP_005383176.1	ATP-dependent protease subunit HslV	-
K09K1_RS15465 (K09K1_30700)	hslU	1441377..1442708 (+)	1332	WP_005397950.1	HslU--HslV peptidase ATPase subunit	-
K09K1_RS15470 (K09K1_30710)	-	1443122..1443346 (-)	225	WP_029857381.1	hypothetical protein	-
K09K1_RS15475 (K09K1_30720)	-	1443530..1444357 (-)	828	WP_020835168.1	DUF5718 family protein	-

Sequence

Protein

• Length: 342 a.a.
• Molecular weight: 37751.39 Da
• Isoelectric Point: 6.2464

>NTDB_id=204097 K09K1_RS15450 WP_418369043.1 1438885..1439913(+) (cytR) [Vibrio alginolyticus strain K09K1]
MNERLNTMATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEDAVLEAGYSPNSLARNLRRNESKTIVTIVPDICDPY
FSEIIRGIEDAAMEHGYLVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELEL
PTVHIDNLTSAFEAVNYLTQLGHKRIAQISGPDTAILCQFRQQGYQQALRRAGINKDPQYSVITEFSFDGGAKAVRKLLE
LPEPPTAIFCHCDTMAIGAIQEAKKLGLRVPQDLSVVGFDDINFAQYCDPPLTTISQPRYEIGRQAMLMMLEMLKGHDVH
SGSRLLETNLVIRGSAAPPQRP

Nucleotide

• Length: 1029 bp

>NTDB_id=204097 K09K1_RS15450 WP_418369043.1 1438885..1439913(+) (cytR) [Vibrio alginolyticus strain K09K1]
ATAAACGAGAGGTTAAATACTATGGCGACAATGAAGGATGTTGCCCAGCTTGCGGGAGTGTCTACGGCTACGGTATCTCG
AGCATTAATGAACCCAGAAAAAGTATCTTCTTCAACGAGAAAAAGAGTAGAAGATGCCGTACTTGAAGCGGGTTATTCTC
CAAACTCATTAGCGCGTAACTTACGTAGAAACGAATCAAAAACCATTGTCACTATCGTTCCCGACATCTGTGATCCTTAT
TTTTCTGAAATTATTCGCGGCATTGAAGATGCTGCCATGGAACATGGCTATCTAGTCCTGCTGGGCGATAGCGGACAACA
GAAGAAACGCGAAAGTTCTTTCGTTAACCTCGTATTTACTAAGCAGGCGGATGGAATGCTACTGCTTGGCACAGATCTAC
CGTTTGATGTCAGTAAGCCAGAACAAAAGAACTTACCTCCGATGGTAATGGCGTGTGAATTTGCGCCAGAGTTAGAACTT
CCGACAGTACATATTGACAACCTGACCTCAGCATTTGAAGCGGTGAATTACCTAACCCAACTAGGTCATAAACGCATTGC
TCAAATCTCTGGACCAGATACAGCAATATTGTGTCAGTTCCGCCAGCAAGGCTACCAACAAGCCCTGCGCCGTGCCGGCA
TCAATAAAGATCCACAATATAGTGTCATTACTGAGTTCTCTTTTGATGGCGGAGCAAAAGCCGTTCGTAAACTGCTCGAA
TTGCCTGAGCCACCAACGGCCATTTTCTGTCACTGTGACACAATGGCCATCGGCGCAATTCAAGAAGCGAAAAAGCTTGG
CTTACGAGTACCGCAAGATCTCTCTGTTGTGGGCTTTGATGACATTAACTTCGCTCAGTACTGCGATCCGCCGTTGACCA
CTATCTCTCAGCCTCGCTATGAGATTGGTCGACAAGCGATGCTAATGATGCTTGAGATGTTAAAAGGCCACGACGTGCAT
TCAGGCTCGCGTTTGCTTGAAACTAATCTCGTCATTCGCGGAAGTGCTGCGCCACCACAGCGCCCTTAA

Domains

Predicted by InterproScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (175-335)

• Bacterial regulatory proteins, lacI family (LacI) (10-55)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	98.23	99.123	0.974
cytR	Vibrio cholerae C6706	89.521	97.661	0.874