Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | K10K4_RS14830 | Genome accession | NZ_CP017911 |
| Coordinates | 3130607..3131182 (-) | Length | 191 a.a. |
| NCBI ID | WP_017821732.1 | Uniprot ID | A0A2I3CBW9 |
| Organism | Vibrio alginolyticus strain K10K4 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 3125607..3136182
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K10K4_RS14805 (K10K4_28970) | aroB | 3125906..3127006 (-) | 1101 | WP_005381318.1 | 3-dehydroquinate synthase | - |
| K10K4_RS14810 (K10K4_28980) | aroK | 3127039..3127557 (-) | 519 | WP_005381319.1 | shikimate kinase AroK | - |
| K10K4_RS14815 (K10K4_28990) | pilQ | 3127745..3129490 (-) | 1746 | WP_005382765.1 | type IV pilus secretin PilQ | Machinery gene |
| K10K4_RS14820 (K10K4_29000) | pilP | 3129516..3130031 (-) | 516 | WP_086047068.1 | pilus assembly protein PilP | Machinery gene |
| K10K4_RS14825 (K10K4_29010) | pilO | 3130021..3130614 (-) | 594 | WP_017633532.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| K10K4_RS14830 (K10K4_29020) | pilN | 3130607..3131182 (-) | 576 | WP_017821732.1 | PilN domain-containing protein | Machinery gene |
| K10K4_RS14835 (K10K4_29030) | pilM | 3131166..3132182 (-) | 1017 | WP_017821733.1 | type IV pilus biogenesis protein PilM | Machinery gene |
| K10K4_RS14840 (K10K4_29040) | - | 3132327..3134888 (+) | 2562 | WP_025768081.1 | penicillin-binding protein 1A | - |
| K10K4_RS14845 (K10K4_29050) | oxyR | 3134942..3135853 (-) | 912 | WP_005381326.1 | DNA-binding transcriptional regulator OxyR | - |
Sequence
Protein
Download Length: 191 a.a. Molecular weight: 22349.86 Da Isoelectric Point: 7.4658
>NTDB_id=203972 K10K4_RS14830 WP_017821732.1 3130607..3131182(-) (pilN) [Vibrio alginolyticus strain K10K4]
MLYRINLLPWRESQREEHRRRFISLVALGMLVAVGIQWGIGKFFEYQQDQQQERLDYLTHYIAELDQRIEAMKIAEQEHS
KILERLKVVEGLQNGRNKTTEFMNLMPAVIPEGVYVDKIKMNDLEIEISGISDSTPKLATMLDNMERSAKLNDVEMHSIV
HGKARFGKEFQTFKVSFMFKVTEKKLEAQRG
MLYRINLLPWRESQREEHRRRFISLVALGMLVAVGIQWGIGKFFEYQQDQQQERLDYLTHYIAELDQRIEAMKIAEQEHS
KILERLKVVEGLQNGRNKTTEFMNLMPAVIPEGVYVDKIKMNDLEIEISGISDSTPKLATMLDNMERSAKLNDVEMHSIV
HGKARFGKEFQTFKVSFMFKVTEKKLEAQRG
Nucleotide
Download Length: 576 bp
>NTDB_id=203972 K10K4_RS14830 WP_017821732.1 3130607..3131182(-) (pilN) [Vibrio alginolyticus strain K10K4]
GTGCTTTATCGCATTAATTTACTTCCTTGGCGAGAGAGTCAAAGAGAAGAGCACCGACGTCGTTTCATCAGTTTGGTCGC
ATTAGGCATGTTGGTCGCTGTTGGCATCCAGTGGGGTATTGGAAAGTTTTTTGAGTACCAACAAGATCAACAACAGGAGC
GGCTCGATTACCTCACTCACTACATTGCCGAACTCGACCAGCGTATTGAAGCAATGAAAATTGCAGAGCAAGAGCACAGC
AAAATCCTCGAACGTCTAAAGGTCGTTGAAGGTTTACAAAACGGACGAAACAAAACGACCGAGTTCATGAACTTAATGCC
TGCCGTTATCCCTGAAGGTGTATATGTCGACAAGATCAAAATGAATGATCTGGAAATTGAGATCTCTGGGATCTCTGATA
GCACTCCAAAACTTGCCACGATGCTGGACAACATGGAGCGCTCGGCCAAGTTGAACGACGTAGAAATGCATTCCATCGTT
CACGGCAAAGCCCGTTTTGGGAAAGAGTTTCAAACATTCAAAGTGTCTTTCATGTTCAAAGTAACGGAGAAGAAATTGGA
GGCTCAACGTGGTTGA
GTGCTTTATCGCATTAATTTACTTCCTTGGCGAGAGAGTCAAAGAGAAGAGCACCGACGTCGTTTCATCAGTTTGGTCGC
ATTAGGCATGTTGGTCGCTGTTGGCATCCAGTGGGGTATTGGAAAGTTTTTTGAGTACCAACAAGATCAACAACAGGAGC
GGCTCGATTACCTCACTCACTACATTGCCGAACTCGACCAGCGTATTGAAGCAATGAAAATTGCAGAGCAAGAGCACAGC
AAAATCCTCGAACGTCTAAAGGTCGTTGAAGGTTTACAAAACGGACGAAACAAAACGACCGAGTTCATGAACTTAATGCC
TGCCGTTATCCCTGAAGGTGTATATGTCGACAAGATCAAAATGAATGATCTGGAAATTGAGATCTCTGGGATCTCTGATA
GCACTCCAAAACTTGCCACGATGCTGGACAACATGGAGCGCTCGGCCAAGTTGAACGACGTAGAAATGCATTCCATCGTT
CACGGCAAAGCCCGTTTTGGGAAAGAGTTTCAAACATTCAAAGTGTCTTTCATGTTCAAAGTAACGGAGAAGAAATTGGA
GGCTCAACGTGGTTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Vibrio campbellii strain DS40M4 |
82.199 |
100 |
0.822 |
| pilN | Vibrio cholerae strain A1552 |
63.277 |
92.67 |
0.586 |