Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | K05K4_RS14885 | Genome accession | NZ_CP017902 |
| Coordinates | 3109539..3110114 (-) | Length | 191 a.a. |
| NCBI ID | WP_017821732.1 | Uniprot ID | A0A2I3CBW9 |
| Organism | Vibrio alginolyticus strain K05K4 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3104539..3115114
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K05K4_RS14860 (K05K4_28860) | aroB | 3104838..3105938 (-) | 1101 | WP_005381318.1 | 3-dehydroquinate synthase | - |
| K05K4_RS14865 (K05K4_28870) | aroK | 3105971..3106489 (-) | 519 | WP_005381319.1 | shikimate kinase AroK | - |
| K05K4_RS14870 (K05K4_28880) | pilQ | 3106677..3108422 (-) | 1746 | WP_005382765.1 | type IV pilus secretin PilQ | Machinery gene |
| K05K4_RS14875 (K05K4_28890) | pilP | 3108448..3108963 (-) | 516 | WP_086047068.1 | pilus assembly protein PilP | Machinery gene |
| K05K4_RS14880 (K05K4_28900) | pilO | 3108953..3109546 (-) | 594 | WP_017633532.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| K05K4_RS14885 (K05K4_28910) | pilN | 3109539..3110114 (-) | 576 | WP_017821732.1 | PilN domain-containing protein | Machinery gene |
| K05K4_RS14890 (K05K4_28920) | pilM | 3110098..3111114 (-) | 1017 | WP_017821733.1 | type IV pilus biogenesis protein PilM | Machinery gene |
| K05K4_RS14895 (K05K4_28930) | - | 3111259..3113820 (+) | 2562 | WP_025768081.1 | penicillin-binding protein 1A | - |
| K05K4_RS14900 (K05K4_28940) | oxyR | 3113874..3114785 (-) | 912 | WP_005381326.1 | DNA-binding transcriptional regulator OxyR | - |
Sequence
Protein
Download Length: 191 a.a. Molecular weight: 22349.86 Da Isoelectric Point: 7.4658
>NTDB_id=203872 K05K4_RS14885 WP_017821732.1 3109539..3110114(-) (pilN) [Vibrio alginolyticus strain K05K4]
MLYRINLLPWRESQREEHRRRFISLVALGMLVAVGIQWGIGKFFEYQQDQQQERLDYLTHYIAELDQRIEAMKIAEQEHS
KILERLKVVEGLQNGRNKTTEFMNLMPAVIPEGVYVDKIKMNDLEIEISGISDSTPKLATMLDNMERSAKLNDVEMHSIV
HGKARFGKEFQTFKVSFMFKVTEKKLEAQRG
MLYRINLLPWRESQREEHRRRFISLVALGMLVAVGIQWGIGKFFEYQQDQQQERLDYLTHYIAELDQRIEAMKIAEQEHS
KILERLKVVEGLQNGRNKTTEFMNLMPAVIPEGVYVDKIKMNDLEIEISGISDSTPKLATMLDNMERSAKLNDVEMHSIV
HGKARFGKEFQTFKVSFMFKVTEKKLEAQRG
Nucleotide
Download Length: 576 bp
>NTDB_id=203872 K05K4_RS14885 WP_017821732.1 3109539..3110114(-) (pilN) [Vibrio alginolyticus strain K05K4]
GTGCTTTATCGCATTAATTTACTTCCTTGGCGAGAGAGTCAAAGAGAAGAGCACCGACGTCGTTTCATCAGTTTGGTCGC
ATTAGGCATGTTGGTCGCTGTTGGCATCCAGTGGGGTATTGGAAAGTTTTTTGAGTACCAACAAGATCAACAACAGGAGC
GGCTCGATTACCTCACTCACTACATTGCCGAACTCGACCAGCGTATTGAAGCAATGAAAATTGCAGAGCAAGAGCACAGC
AAAATCCTCGAACGTCTAAAGGTCGTTGAAGGTTTACAAAACGGACGAAACAAAACGACCGAGTTCATGAACTTAATGCC
TGCCGTTATCCCTGAAGGTGTATATGTCGACAAGATCAAAATGAATGATCTGGAAATTGAGATCTCTGGGATCTCTGATA
GCACTCCAAAACTTGCCACGATGCTGGACAACATGGAGCGCTCGGCCAAGTTGAACGACGTAGAAATGCATTCCATCGTT
CACGGCAAAGCCCGTTTTGGGAAAGAGTTTCAAACATTCAAAGTGTCTTTCATGTTCAAAGTAACGGAGAAGAAATTGGA
GGCTCAACGTGGTTGA
GTGCTTTATCGCATTAATTTACTTCCTTGGCGAGAGAGTCAAAGAGAAGAGCACCGACGTCGTTTCATCAGTTTGGTCGC
ATTAGGCATGTTGGTCGCTGTTGGCATCCAGTGGGGTATTGGAAAGTTTTTTGAGTACCAACAAGATCAACAACAGGAGC
GGCTCGATTACCTCACTCACTACATTGCCGAACTCGACCAGCGTATTGAAGCAATGAAAATTGCAGAGCAAGAGCACAGC
AAAATCCTCGAACGTCTAAAGGTCGTTGAAGGTTTACAAAACGGACGAAACAAAACGACCGAGTTCATGAACTTAATGCC
TGCCGTTATCCCTGAAGGTGTATATGTCGACAAGATCAAAATGAATGATCTGGAAATTGAGATCTCTGGGATCTCTGATA
GCACTCCAAAACTTGCCACGATGCTGGACAACATGGAGCGCTCGGCCAAGTTGAACGACGTAGAAATGCATTCCATCGTT
CACGGCAAAGCCCGTTTTGGGAAAGAGTTTCAAACATTCAAAGTGTCTTTCATGTTCAAAGTAACGGAGAAGAAATTGGA
GGCTCAACGTGGTTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Vibrio campbellii strain DS40M4 |
82.199 |
100 |
0.822 |
| pilN | Vibrio cholerae strain A1552 |
63.277 |
92.67 |
0.586 |