Detailed information NTG0203854

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: K05K4_RS13335
• Genome accession: NZ_CP017902
• Coordinates: 2796477..2799863 (+)
• Length: 1128 a.a.
• NCBI ID: WP_086047026.1
• Uniprot ID: -
• Organism: Vibrio alginolyticus strain K05K4
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 2791477..2804863

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K05K4_RS13315 (K05K4_25850)	erpA	2791834..2792175 (-)	342	WP_005380031.1	iron-sulfur cluster insertion protein ErpA	-
K05K4_RS13320 (K05K4_25860)	hemL	2792422..2793717 (+)	1296	WP_086047025.1	glutamate-1-semialdehyde 2,1-aminomutase	-
K05K4_RS13325 (K05K4_25870)	-	2794063..2795148 (+)	1086	WP_005386541.1	AI-2E family transporter	-
K05K4_RS13330 (K05K4_25880)	rsmC	2795225..2796250 (+)	1026	WP_017635899.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
K05K4_RS13335 (K05K4_25890)	chiS	2796477..2799863 (+)	3387	WP_086047026.1	response regulator	Regulator
K05K4_RS13340 (K05K4_25900)	-	2800646..2802328 (+)	1683	WP_005380037.1	ABC transporter substrate-binding protein	-
K05K4_RS13345 (K05K4_25910)	-	2802499..2803485 (+)	987	WP_005380038.1	ABC transporter permease	-
K05K4_RS13350 (K05K4_25920)	-	2803488..2804513 (+)	1026	WP_054730004.1	ABC transporter permease	-

Sequence

Protein

• Length: 1128 a.a.
• Molecular weight: 126887.56 Da
• Isoelectric Point: 5.5653

>NTDB_id=203854 K05K4_RS13335 WP_086047026.1 2796477..2799863(+) (chiS) [Vibrio alginolyticus strain K05K4]
MFKFYKKQKFKRLQSTLMTAFLVLSITPLTITAIFFLQSHSKDLQEQSTSHLLSVRDTKQQQIIDYFEARETEVMGFVRS
ELAYASGGRFYGLVNAFSRLGNDIEESRKNAQQRYIEGSGDQIKTSTLPESSNYVGSERYRLLHKRYHWAYLELLKRSDF
NDILLVDINGNVTYSINKDDNYGTNLLSGPYKDSALGKTFKRLADDVTERRKVNEDYTPVIVSDFELEGGKSVAWLGAPI
VQQGYLHSYAMFRLPNNGITKLAADANRESSINTLLVGNDHQPRTINTKQDDIKNSLEVIDKALSGAFGVGTYTNGLGEE
IIAAYAPIETRGVIWALVVQLPENEAFARIHQLEKLFVIAMLIAIILVVIASHYLSNFITSPLLKLTWVAEKVSAGDLDD
TSFNTVRKDEIGRLALSFERMQRSIREKIQTIKKQNEELESNIQIIQKQNEELQLADKLKDEFLATTSHELRTPLHGMVG
IAETLASGANGAIPASQKYQLDIIIKSGQRLANLVDDLLDYHKMRYGSMDIQKSAVSLGSATRLVLELSSHLLGSKTIRI
INQVPADLKAVSADPQRLEQVLYNLIGNAIKYTSEGKIVISANVVDDHVRVQVVDTGQGIPAEQLEHIFEPLIQAGQDAS
RYRQGAGLGLSISRQLIELMGGSLYVSSQPMVGTTFSFTLPLASEEEIQATQTLAAHGHFQIPEVNVENREDLSLPENPD
GPLLYVADDEPVNLRVLESFLRLEGYRVRTVSDGPETLALVEQEKPELLLLDIMMPGMSGYQVCSELRETYDHAELPIIM
LTALSQTEDRVRGFEAGANDYLSKPFNKQELAARIQAHLTASKAEMRHMENKVLESELRQRAVVEASLLETQGRLLEQLE
SAPEAIICLREDKRIRFANEAACKLFKRSLEQLKRSSADELIAPKYLTVKQPHYCGKIDIYIEDIRQNIEADILKLPEGS
GLDIMYIFNVGGGASAARIHNLETAVEVLSSYAFDGDKDQLQKLKELGGEFTRLADKALGNKKDKQELMREVLVDAMTHA
LEYWESVSGESKFAFAEQSGLWRVYLDRSTLQTRTLDKYMRIETLPKTPRWRTVLSSIEFILEHCKEQSPERAYIEAQRD
KLQRLLTS

Nucleotide

• Length: 3387 bp

>NTDB_id=203854 K05K4_RS13335 WP_086047026.1 2796477..2799863(+) (chiS) [Vibrio alginolyticus strain K05K4]
ATGTTTAAATTCTACAAAAAACAGAAATTTAAGCGCCTTCAGAGTACACTGATGACCGCATTTCTGGTGCTCAGTATCAC
ACCTCTTACCATTACTGCGATCTTTTTCTTGCAGTCCCACAGTAAAGATCTGCAAGAACAAAGCACCTCGCACTTACTGT
CTGTTCGAGATACAAAACAGCAGCAAATCATCGACTACTTTGAGGCACGAGAAACCGAAGTCATGGGCTTTGTGCGCTCA
GAGTTGGCTTACGCCAGTGGTGGCCGATTCTACGGTCTCGTCAATGCTTTTAGTCGTTTAGGCAATGATATTGAAGAGTC
TCGTAAAAACGCCCAACAGCGCTACATCGAGGGCAGCGGAGACCAAATCAAAACCTCAACGTTACCCGAGTCATCCAACT
ATGTAGGAAGTGAACGTTACAGACTTTTGCACAAACGCTATCATTGGGCCTACTTGGAGCTCCTCAAGCGCTCTGATTTT
AATGACATTTTGCTGGTCGACATCAATGGTAACGTCACCTACTCGATCAACAAAGACGATAACTACGGAACGAACTTGTT
ATCAGGCCCCTACAAAGACTCGGCACTTGGCAAAACTTTCAAGCGTCTCGCCGATGATGTGACTGAACGTCGAAAAGTAA
ACGAAGACTACACTCCTGTGATTGTGTCTGACTTCGAGCTGGAAGGGGGTAAATCAGTCGCTTGGCTAGGTGCACCAATT
GTTCAGCAAGGTTATCTACACAGCTATGCCATGTTCCGCTTGCCAAATAATGGCATCACTAAGTTAGCCGCAGACGCTAA
TCGAGAGTCATCCATTAACACCCTGCTGGTTGGAAATGATCACCAACCTCGCACAATTAACACGAAACAAGACGACATTA
AGAACAGTTTAGAAGTGATCGATAAAGCACTCTCTGGTGCGTTTGGTGTCGGCACTTACACGAACGGCTTAGGTGAAGAA
ATCATCGCGGCTTATGCACCGATTGAAACTCGTGGTGTGATTTGGGCGCTCGTCGTACAGTTACCAGAAAACGAAGCTTT
CGCTCGTATCCATCAACTCGAAAAACTATTCGTTATCGCTATGTTGATCGCCATTATCCTTGTGGTGATAGCTTCTCACT
ATTTATCAAACTTTATCACTTCTCCGTTGCTGAAATTGACTTGGGTTGCCGAAAAGGTCTCTGCAGGGGATCTTGATGAC
ACGTCTTTTAATACGGTTCGTAAAGATGAAATTGGTCGGCTTGCGTTAAGCTTTGAACGAATGCAACGCTCTATTCGAGA
GAAGATTCAAACCATTAAGAAGCAAAATGAAGAACTAGAAAGCAACATACAGATCATTCAAAAACAGAATGAAGAACTGC
AATTGGCCGATAAATTAAAAGATGAATTCTTAGCCACGACTTCTCATGAACTTCGTACACCGTTACACGGCATGGTCGGG
ATTGCTGAAACCTTAGCGTCCGGCGCCAATGGTGCGATCCCCGCTAGCCAGAAATATCAGCTTGATATCATCATTAAAAG
TGGTCAGCGTCTCGCTAATCTAGTCGATGACTTGTTGGATTATCATAAAATGCGTTATGGAAGCATGGATATCCAGAAAT
CAGCAGTGAGTTTGGGCAGTGCAACACGATTGGTTTTAGAGCTTTCTAGCCATTTACTCGGAAGTAAAACCATCCGCATC
ATCAACCAAGTCCCAGCGGATTTAAAAGCAGTGTCAGCTGACCCGCAACGCCTTGAACAAGTGCTATATAACCTGATTGG
CAATGCGATTAAATACACCTCAGAAGGTAAAATTGTTATCTCCGCTAATGTGGTAGATGATCATGTACGCGTACAAGTTG
TGGATACTGGACAAGGAATTCCCGCAGAACAACTTGAACATATTTTTGAACCACTCATCCAAGCAGGGCAAGACGCGAGC
CGTTATCGTCAAGGTGCAGGACTTGGGCTCTCCATTAGCCGTCAATTGATCGAATTAATGGGAGGCTCGTTATACGTCAG
TAGCCAACCAATGGTCGGAACTACCTTCAGTTTCACTTTACCGCTCGCCAGTGAAGAAGAAATCCAAGCAACCCAGACTC
TAGCTGCGCACGGACACTTCCAAATCCCTGAAGTTAATGTAGAGAACCGCGAAGACTTATCACTTCCAGAGAACCCAGAC
GGCCCGTTACTGTATGTTGCTGACGATGAACCAGTAAACTTACGCGTGCTTGAAAGCTTTTTACGTTTAGAGGGCTATCG
TGTGCGTACCGTCTCCGATGGGCCAGAAACGTTAGCGCTCGTCGAGCAAGAGAAGCCGGAACTTCTGTTATTGGATATCA
TGATGCCAGGCATGAGCGGCTACCAAGTTTGTAGTGAACTACGTGAAACCTATGATCATGCCGAGTTGCCAATCATTATG
CTCACCGCACTCAGTCAAACAGAAGATCGTGTAAGAGGTTTTGAAGCAGGAGCCAACGACTATTTATCGAAACCATTTAA
TAAACAAGAGTTGGCGGCACGTATCCAAGCGCATTTAACGGCAAGTAAAGCAGAAATGCGCCATATGGAAAACAAAGTGC
TAGAGTCTGAACTTAGACAGCGAGCAGTCGTTGAAGCAAGCTTACTTGAGACTCAAGGTCGTTTGTTGGAACAGCTAGAA
TCGGCTCCTGAAGCTATCATCTGTCTACGTGAAGACAAGCGTATTCGCTTTGCTAACGAAGCTGCTTGTAAGCTATTCAA
GCGCAGCTTAGAACAGCTAAAGCGCTCATCTGCTGATGAGCTGATTGCCCCTAAATATCTAACCGTCAAACAACCTCATT
ACTGTGGAAAGATTGATATCTATATTGAAGATATTCGTCAGAACATCGAAGCAGACATTCTTAAGCTCCCTGAAGGTTCA
GGGTTAGATATCATGTACATCTTTAATGTCGGCGGTGGAGCCAGTGCCGCTCGCATACATAATCTAGAAACCGCCGTAGA
AGTGCTTTCAAGTTATGCATTTGATGGTGACAAAGACCAATTGCAAAAGCTAAAAGAGCTTGGCGGAGAATTTACGCGCC
TTGCAGACAAAGCACTCGGTAATAAAAAGGACAAGCAAGAACTTATGCGGGAAGTTCTAGTCGACGCAATGACACATGCT
TTAGAGTATTGGGAATCTGTATCGGGTGAAAGTAAATTCGCATTTGCAGAGCAAAGTGGCTTGTGGCGCGTTTATCTAGA
CCGAAGTACTTTACAAACACGCACCTTAGATAAATACATGCGTATAGAAACATTACCCAAAACACCACGTTGGAGAACGG
TGCTAAGCTCGATAGAGTTCATTCTCGAACACTGCAAAGAACAGAGCCCCGAGAGAGCATACATAGAAGCACAACGAGAT
AAACTACAGCGACTATTGACCAGCTAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-683)

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

• HAMP domain (HAMP) (375-427)

• PAS fold (PAS) (876-924)

• Response regulator receiver domain (Response_reg) (726-836)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	76.528	100	0.766