Detailed information    

insolico Bioinformatically predicted

Overview


Name   luxS   Type   Regulator
Locus tag   CGP95_RS11265 Genome accession   NZ_CP022899
Coordinates   2204102..2204572 (+) Length   156 a.a.
NCBI ID   WP_000164421.1    Uniprot ID   P65329
Organism   Staphylococcus aureus strain 143     
Function   induction of competence (predicted from homology)   
Competence regulation

Genomic Context


Location: 2199102..2209572
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CGP95_RS11245 (CGP95_02073) coaW 2199416..2200219 (+) 804 WP_000862728.1 type II pantothenate kinase -
  CGP95_RS11250 (CGP95_02074) - 2200345..2201016 (-) 672 WP_000120549.1 DUF2750 domain-containing protein -
  CGP95_RS11255 (CGP95_02075) - 2201415..2202608 (-) 1194 WP_000183722.1 hypothetical protein -
  CGP95_RS11260 (CGP95_02076) - 2202608..2203792 (-) 1185 WP_001291490.1 M20 family metallopeptidase -
  CGP95_RS11265 (CGP95_02077) luxS 2204102..2204572 (+) 471 WP_000164421.1 S-ribosylhomocysteine lyase Regulator
  CGP95_RS11270 (CGP95_02078) - 2204724..2205074 (-) 351 WP_001024028.1 membrane protein -
  CGP95_RS11275 (CGP95_02079) - 2205088..2206389 (-) 1302 WP_115283878.1 pyrimidine-nucleoside phosphorylase -
  CGP95_RS11285 (CGP95_02080) deoC 2206669..2207331 (-) 663 WP_001083335.1 deoxyribose-phosphate aldolase -
  CGP95_RS11290 (CGP95_02081) deoD 2207646..2208356 (+) 711 WP_000160304.1 purine-nucleoside phosphorylase -
  CGP95_RS11295 (CGP95_02082) - 2208477..2208920 (-) 444 WP_000070866.1 Dps family protein -
  CGP95_RS11300 (CGP95_02083) - 2209120..2209533 (-) 414 WP_001123310.1 thiol-disulfide oxidoreductase DCC family protein -

Sequence


Protein


Download         Length: 156 a.a.        Molecular weight: 17513.76 Da        Isoelectric Point: 5.4567

>NTDB_id=203759 CGP95_RS11265 WP_000164421.1 2204102..2204572(+) (luxS) [Staphylococcus aureus strain 143]
MTKMNVESFNLDHTKVVAPFIRLAGTMEGLNGDVIHKYDIRFKQPNKEHMDMPGLHSLEHLMAENIRNHSDKVVDLSPMG
CQTGFYVSFINHDNYDDVLNIVEATLNDVLNATEVPACNEVQCGWAASHSLEGAKTIAQAFLDKRNEWHDVFGTGK

Nucleotide


Download         Length: 471 bp        

>NTDB_id=203759 CGP95_RS11265 WP_000164421.1 2204102..2204572(+) (luxS) [Staphylococcus aureus strain 143]
ATGACAAAAATGAATGTTGAAAGTTTTAATTTAGATCATACTAAAGTGGTTGCCCCATTTATTAGATTAGCGGGAACGAT
GGAAGGATTAAACGGAGATGTCATTCACAAATACGACATTCGTTTCAAACAACCAAACAAAGAACATATGGATATGCCTG
GATTGCATTCATTAGAACATTTAATGGCTGAAAATATTAGAAATCATAGTGACAAAGTCGTTGATTTAAGTCCTATGGGT
TGCCAAACTGGTTTCTATGTATCATTTATTAATCATGATAATTATGATGATGTATTAAATATTGTTGAAGCAACTTTAAA
TGATGTGCTAAATGCTACTGAGGTGCCTGCTTGTAATGAAGTACAATGTGGCTGGGCAGCAAGTCATTCATTAGAAGGTG
CTAAAACTATCGCTCAAGCATTTCTAGACAAACGAAACGAATGGCATGATGTTTTCGGTACAGGAAAATAA

Domains


Predicted by InterProScan.

(5-148)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB P65329

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxS Vibrio cholerae strain A1552

44.681

90.385

0.404


Multiple sequence alignment