Detailed information NTG0203707

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: K04M1_RS13330
• Genome accession: NZ_CP017891
• Coordinates: 2796025..2799411 (+)
• Length: 1128 a.a.
• NCBI ID: WP_086047026.1
• Uniprot ID: -
• Organism: Vibrio alginolyticus strain K04M1
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 2791025..2804411

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K04M1_RS13310 (K04M1_25810)	erpA	2791382..2791723 (-)	342	WP_005380031.1	iron-sulfur cluster insertion protein ErpA	-
K04M1_RS13315 (K04M1_25820)	hemL	2791970..2793265 (+)	1296	WP_086047025.1	glutamate-1-semialdehyde 2,1-aminomutase	-
K04M1_RS13320 (K04M1_25830)	-	2793611..2794696 (+)	1086	WP_005386541.1	AI-2E family transporter	-
K04M1_RS13325 (K04M1_25840)	rsmC	2794773..2795798 (+)	1026	WP_017635899.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
K04M1_RS13330 (K04M1_25850)	chiS	2796025..2799411 (+)	3387	WP_086047026.1	response regulator	Regulator
K04M1_RS13335 (K04M1_25860)	-	2800194..2801876 (+)	1683	WP_005380037.1	ABC transporter substrate-binding protein	-
K04M1_RS13340 (K04M1_25870)	-	2802047..2803033 (+)	987	WP_005380038.1	ABC transporter permease	-
K04M1_RS13345 (K04M1_25880)	-	2803036..2804061 (+)	1026	WP_054730004.1	ABC transporter permease	-

Sequence

Protein

• Length: 1128 a.a.
• Molecular weight: 126887.56 Da
• Isoelectric Point: 5.5653

>NTDB_id=203707 K04M1_RS13330 WP_086047026.1 2796025..2799411(+) (chiS) [Vibrio alginolyticus strain K04M1]
MFKFYKKQKFKRLQSTLMTAFLVLSITPLTITAIFFLQSHSKDLQEQSTSHLLSVRDTKQQQIIDYFEARETEVMGFVRS
ELAYASGGRFYGLVNAFSRLGNDIEESRKNAQQRYIEGSGDQIKTSTLPESSNYVGSERYRLLHKRYHWAYLELLKRSDF
NDILLVDINGNVTYSINKDDNYGTNLLSGPYKDSALGKTFKRLADDVTERRKVNEDYTPVIVSDFELEGGKSVAWLGAPI
VQQGYLHSYAMFRLPNNGITKLAADANRESSINTLLVGNDHQPRTINTKQDDIKNSLEVIDKALSGAFGVGTYTNGLGEE
IIAAYAPIETRGVIWALVVQLPENEAFARIHQLEKLFVIAMLIAIILVVIASHYLSNFITSPLLKLTWVAEKVSAGDLDD
TSFNTVRKDEIGRLALSFERMQRSIREKIQTIKKQNEELESNIQIIQKQNEELQLADKLKDEFLATTSHELRTPLHGMVG
IAETLASGANGAIPASQKYQLDIIIKSGQRLANLVDDLLDYHKMRYGSMDIQKSAVSLGSATRLVLELSSHLLGSKTIRI
INQVPADLKAVSADPQRLEQVLYNLIGNAIKYTSEGKIVISANVVDDHVRVQVVDTGQGIPAEQLEHIFEPLIQAGQDAS
RYRQGAGLGLSISRQLIELMGGSLYVSSQPMVGTTFSFTLPLASEEEIQATQTLAAHGHFQIPEVNVENREDLSLPENPD
GPLLYVADDEPVNLRVLESFLRLEGYRVRTVSDGPETLALVEQEKPELLLLDIMMPGMSGYQVCSELRETYDHAELPIIM
LTALSQTEDRVRGFEAGANDYLSKPFNKQELAARIQAHLTASKAEMRHMENKVLESELRQRAVVEASLLETQGRLLEQLE
SAPEAIICLREDKRIRFANEAACKLFKRSLEQLKRSSADELIAPKYLTVKQPHYCGKIDIYIEDIRQNIEADILKLPEGS
GLDIMYIFNVGGGASAARIHNLETAVEVLSSYAFDGDKDQLQKLKELGGEFTRLADKALGNKKDKQELMREVLVDAMTHA
LEYWESVSGESKFAFAEQSGLWRVYLDRSTLQTRTLDKYMRIETLPKTPRWRTVLSSIEFILEHCKEQSPERAYIEAQRD
KLQRLLTS

Nucleotide

• Length: 3387 bp

>NTDB_id=203707 K04M1_RS13330 WP_086047026.1 2796025..2799411(+) (chiS) [Vibrio alginolyticus strain K04M1]
ATGTTTAAATTCTACAAAAAACAGAAATTTAAGCGCCTTCAGAGTACACTGATGACCGCATTTCTGGTGCTCAGTATCAC
ACCTCTTACCATTACTGCGATCTTTTTCTTGCAGTCCCACAGTAAAGATCTGCAAGAACAAAGCACCTCGCACTTACTGT
CTGTTCGAGATACAAAACAGCAGCAAATCATCGACTACTTTGAGGCACGAGAAACCGAAGTCATGGGCTTTGTGCGCTCA
GAGTTGGCTTACGCCAGTGGTGGCCGATTCTACGGTCTCGTCAATGCTTTTAGTCGTTTAGGCAATGATATTGAAGAGTC
TCGTAAAAACGCCCAACAGCGCTACATCGAGGGCAGCGGAGACCAAATCAAAACCTCAACGTTACCCGAGTCATCCAACT
ATGTAGGAAGTGAACGTTACAGACTTTTGCACAAACGCTATCATTGGGCCTACTTGGAGCTCCTCAAGCGCTCTGATTTT
AATGACATTTTGCTGGTCGACATCAATGGTAACGTCACCTACTCGATCAACAAAGACGATAACTACGGAACGAACTTGTT
ATCAGGCCCCTACAAAGACTCGGCACTTGGCAAAACTTTCAAGCGTCTCGCCGATGATGTGACTGAACGTCGAAAAGTAA
ACGAAGACTACACTCCTGTGATTGTGTCTGACTTCGAGCTGGAAGGGGGTAAATCAGTCGCTTGGCTAGGTGCACCAATT
GTTCAGCAAGGTTATCTACACAGCTATGCCATGTTCCGCTTGCCAAATAATGGCATCACTAAGTTAGCCGCAGACGCTAA
TCGAGAGTCATCCATTAACACCCTGCTGGTTGGAAATGATCACCAACCTCGCACAATTAACACGAAACAAGACGACATTA
AGAACAGTTTAGAAGTGATCGATAAAGCACTCTCTGGTGCGTTTGGTGTCGGCACTTACACGAACGGCTTAGGTGAAGAA
ATCATCGCGGCTTATGCACCGATTGAAACTCGTGGTGTGATTTGGGCGCTCGTCGTACAGTTACCAGAAAACGAAGCTTT
CGCTCGTATCCATCAACTCGAAAAACTATTCGTTATCGCTATGTTGATCGCCATTATCCTTGTGGTGATAGCTTCTCACT
ATTTATCAAACTTTATCACTTCTCCGTTGCTGAAATTGACTTGGGTTGCCGAAAAGGTCTCTGCAGGGGATCTTGATGAC
ACGTCTTTTAATACGGTTCGTAAAGATGAAATTGGTCGGCTTGCGTTAAGCTTTGAACGAATGCAACGCTCTATTCGAGA
GAAGATTCAAACCATTAAGAAGCAAAATGAAGAACTAGAAAGCAACATACAGATCATTCAAAAACAGAATGAAGAACTGC
AATTGGCCGATAAATTAAAAGATGAATTCTTAGCCACGACTTCTCATGAACTTCGTACACCGTTACACGGCATGGTCGGG
ATTGCTGAAACCTTAGCGTCCGGCGCCAATGGTGCGATCCCCGCTAGCCAGAAATATCAGCTTGATATCATCATTAAAAG
TGGTCAGCGTCTCGCTAATCTAGTCGATGACTTGTTGGATTATCATAAAATGCGTTATGGAAGCATGGATATCCAGAAAT
CAGCAGTGAGTTTGGGCAGTGCAACACGATTGGTTTTAGAGCTTTCTAGCCATTTACTCGGAAGTAAAACCATCCGCATC
ATCAACCAAGTCCCAGCGGATTTAAAAGCAGTGTCAGCTGACCCGCAACGCCTTGAACAAGTGCTATATAACCTGATTGG
CAATGCGATTAAATACACCTCAGAAGGTAAAATTGTTATCTCCGCTAATGTGGTAGATGATCATGTACGCGTACAAGTTG
TGGATACTGGACAAGGAATTCCCGCAGAACAACTTGAACATATTTTTGAACCACTCATCCAAGCAGGGCAAGACGCGAGC
CGTTATCGTCAAGGTGCAGGACTTGGGCTCTCCATTAGCCGTCAATTGATCGAATTAATGGGAGGCTCGTTATACGTCAG
TAGCCAACCAATGGTCGGAACTACCTTCAGTTTCACTTTACCGCTCGCCAGTGAAGAAGAAATCCAAGCAACCCAGACTC
TAGCTGCGCACGGACACTTCCAAATCCCTGAAGTTAATGTAGAGAACCGCGAAGACTTATCACTTCCAGAGAACCCAGAC
GGCCCGTTACTGTATGTTGCTGACGATGAACCAGTAAACTTACGCGTGCTTGAAAGCTTTTTACGTTTAGAGGGCTATCG
TGTGCGTACCGTCTCCGATGGGCCAGAAACGTTAGCGCTCGTCGAGCAAGAGAAGCCGGAACTTCTGTTATTGGATATCA
TGATGCCAGGCATGAGCGGCTACCAAGTTTGTAGTGAACTACGTGAAACCTATGATCATGCCGAGTTGCCAATCATTATG
CTCACCGCACTCAGTCAAACAGAAGATCGTGTAAGAGGTTTTGAAGCAGGAGCCAACGACTATTTATCGAAACCATTTAA
TAAACAAGAGTTGGCGGCACGTATCCAAGCGCATTTAACGGCAAGTAAAGCAGAAATGCGCCATATGGAAAACAAAGTGC
TAGAGTCTGAACTTAGACAGCGAGCAGTCGTTGAAGCAAGCTTACTTGAGACTCAAGGTCGTTTGTTGGAACAGCTAGAA
TCGGCTCCTGAAGCTATCATCTGTCTACGTGAAGACAAGCGTATTCGCTTTGCTAACGAAGCTGCTTGTAAGCTATTCAA
GCGCAGCTTAGAACAGCTAAAGCGCTCATCTGCTGATGAGCTGATTGCCCCTAAATATCTAACCGTCAAACAACCTCATT
ACTGTGGAAAGATTGATATCTATATTGAAGATATTCGTCAGAACATCGAAGCAGACATTCTTAAGCTCCCTGAAGGTTCA
GGGTTAGATATCATGTACATCTTTAATGTCGGCGGTGGAGCCAGTGCCGCTCGCATACATAATCTAGAAACCGCCGTAGA
AGTGCTTTCAAGTTATGCATTTGATGGTGACAAAGACCAATTGCAAAAGCTAAAAGAGCTTGGCGGAGAATTTACGCGCC
TTGCAGACAAAGCACTCGGTAATAAAAAGGACAAGCAAGAACTTATGCGGGAAGTTCTAGTCGACGCAATGACACATGCT
TTAGAGTATTGGGAATCTGTATCGGGTGAAAGTAAATTCGCATTTGCAGAGCAAAGTGGCTTGTGGCGCGTTTATCTAGA
CCGAAGTACTTTACAAACACGCACCTTAGATAAATACATGCGTATAGAAACATTACCCAAAACACCACGTTGGAGAACGG
TGCTAAGCTCGATAGAGTTCATTCTCGAACACTGCAAAGAACAGAGCCCCGAGAGAGCATACATAGAAGCACAACGAGAT
AAACTACAGCGACTATTGACCAGCTAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-683)

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

• HAMP domain (HAMP) (375-427)

• PAS fold (PAS) (876-924)

• Response regulator receiver domain (Response_reg) (726-836)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	76.528	100	0.766