Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   CGP93_RS09985 Genome accession   NZ_CP022897
Coordinates   1962445..1963263 (-) Length   272 a.a.
NCBI ID   WP_001124428.1    Uniprot ID   -
Organism   Staphylococcus aureus strain 128     
Function   repressor of recA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1957445..1968263
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CGP93_RS09960 (CGP93_01838) - 1958538..1959515 (+) 978 WP_047213591.1 metal-dependent hydrolase -
  CGP93_RS09970 (CGP93_01839) - 1959776..1960612 (-) 837 WP_000886457.1 membrane protein -
  CGP93_RS09975 (CGP93_01840) - 1960621..1962138 (-) 1518 WP_042908027.1 ABC transporter ATP-binding protein -
  CGP93_RS09980 (CGP93_01841) - 1962153..1962467 (-) 315 WP_000435806.1 YfhH family protein -
  CGP93_RS09985 (CGP93_01842) recX 1962445..1963263 (-) 819 WP_001124428.1 recombination regulator RecX Regulator
  CGP93_RS09990 (CGP93_01843) sgtB 1963524..1964333 (-) 810 WP_000830380.1 monofunctional peptidoglycan glycosyltransferase SgtB -
  CGP93_RS10000 (CGP93_01846) - 1966336..1966851 (-) 516 WP_115385563.1 type 1 glutamine amidotransferase domain-containing protein -
  CGP93_RS10005 (CGP93_01847) - 1966981..1967142 (-) 162 WP_001005407.1 SE1561 family protein -

Sequence

Protein


Download         Length: 272 a.a.        Molecular weight: 32285.13 Da        Isoelectric Point: 5.6338

>NTDB_id=203575 CGP93_RS09985 WP_001124428.1 1962445..1963263(-) (recX) [Staphylococcus aureus strain 128]
MPKITKIEVQKKNKERFNLFLDEQFEMGIDIDTLVKFNLKKGQQLEAADMAEIQKYDYYRIGLNKAIQYLSYKKRTEKEV
IQYLQKEEISEQAISEVIEYCYREKLIDHQDYAESLKNTMIRTTDKGPKIYQQKLYQLGIEPNIIEMFTELYREQQELDD
IIQIAEKISKTKKGPQNKVKEKVMQSLIQKGFEMETIHAVLNEMDFTQDEAVLDDLLQRDLEKIYNKNRKKYTQQKLISK
TIEGLMRKGYKYDKIKAKLEESGIADGTEEIE

Nucleotide


Download         Length: 819 bp        

>NTDB_id=203575 CGP93_RS09985 WP_001124428.1 1962445..1963263(-) (recX) [Staphylococcus aureus strain 128]
GTGCCGAAGATTACTAAAATAGAAGTTCAAAAGAAAAACAAAGAACGTTTTAATCTTTTTTTAGATGAACAATTTGAAAT
GGGTATAGATATCGATACATTAGTCAAATTTAATTTAAAAAAAGGGCAACAACTTGAAGCTGCTGATATGGCAGAGATTC
AAAAGTATGATTATTATCGCATAGGTTTAAATAAAGCAATCCAATATTTATCATATAAAAAGAGAACTGAAAAAGAAGTT
ATACAATATTTACAAAAAGAAGAGATATCAGAGCAAGCGATTTCTGAAGTGATTGAATATTGTTATCGCGAAAAGTTAAT
CGACCATCAAGATTATGCGGAAAGTTTAAAAAATACAATGATTCGCACGACAGATAAAGGACCTAAAATTTATCAACAAA
AACTATATCAACTTGGTATAGAACCAAATATCATTGAAATGTTTACAGAACTTTATAGAGAACAACAGGAACTTGATGAT
ATTATCCAAATTGCTGAAAAAATATCTAAAACAAAAAAAGGGCCACAAAATAAGGTTAAAGAAAAAGTAATGCAATCTTT
AATTCAAAAAGGGTTTGAAATGGAAACCATTCATGCTGTATTGAATGAAATGGATTTTACACAAGATGAAGCGGTTTTAG
ACGATTTATTACAAAGAGATTTAGAAAAAATTTATAATAAAAATCGAAAGAAGTACACGCAACAGAAATTAATTTCAAAA
ACTATCGAAGGCCTTATGAGAAAAGGATATAAATATGATAAAATTAAAGCTAAATTAGAAGAAAGTGGTATTGCCGATGG
AACAGAAGAAATTGAGTGA

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(84-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Staphylococcus aureus strain ATCC 12600

99.265

100

0.993