Detailed information    

insolico Bioinformatically predicted

Overview


Name   kpsS   Type   Regulator
Locus tag   BLD33_RS01490 Genome accession   NZ_CP017873
Coordinates   286220..287401 (+) Length   393 a.a.
NCBI ID   WP_057992590.1    Uniprot ID   A0A5T1ZLR7
Organism   Campylobacter coli strain WA333     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 281220..292401
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BLD33_RS01475 (BLD33_01475) - 281972..282703 (+) 732 WP_002787833.1 class II aldolase/adducin family protein -
  BLD33_RS01480 (BLD33_01480) - 282700..284199 (+) 1500 WP_002787831.1 sugar phosphate nucleotidyltransferase -
  BLD33_RS01485 (BLD33_01485) - 284196..286223 (+) 2028 WP_002787829.1 capsular polysaccharide biosynthesis protein -
  BLD33_RS01490 (BLD33_01490) kpsS 286220..287401 (+) 1182 WP_057992590.1 capsule biosynthesis protein Regulator
  BLD33_RS01495 (BLD33_01495) - 287470..288591 (+) 1122 WP_002779168.1 DUF829 domain-containing protein -
  BLD33_RS01500 (BLD33_01500) - 288588..289958 (+) 1371 WP_002783822.1 cytochrome P450 -
  BLD33_RS01505 (BLD33_01505) - 289955..290377 (+) 423 WP_002779166.1 hypothetical protein -
  BLD33_RS01510 (BLD33_01510) acpS 290380..290727 (-) 348 WP_002779165.1 holo-ACP synthase -
  BLD33_RS01515 (BLD33_01515) fliL 290727..291263 (-) 537 WP_002779164.1 flagellar basal body-associated protein FliL -

Sequence


Protein


Download         Length: 393 a.a.        Molecular weight: 46418.21 Da        Isoelectric Point: 10.0235

>NTDB_id=203438 BLD33_RS01490 WP_057992590.1 286220..287401(+) (kpsS) [Campylobacter coli strain WA333]
MKFSDKIKKEFSGKTVLLLQGPVGTFFHRLAIKMKKNKTKVFKLNFNGGDFLFYPSGKRCKCDEKDLENFYESFFKEKKI
DAIVMYNDCRLIHAKAIKVAKGLGIGIWIFEEGYLRPYCITFEKDGVNANSSLPRDKNFYLSCNILTKESIKEIPGGFKF
MAFSTFLYWLFSFLLAPFFNNKLHHRTLYPFEFLFWFRSLYRKYLYKFTEKKLNQKIYSLEKKYFLAILQVYNDTQIKYH
YKKSIEEFIEELILSFANHARAKSYLIFKHHPMDRGYRNYSKLINELSQKYHVEGRILYVHDTYLPTLLKKALGCITINS
TVGLSAILEGCPTKVCGNAFYNFEGLAYPKKLQFFWREAHAYKPNPSLVINFKNYLLNTNQFNGNFYKNSFLG

Nucleotide


Download         Length: 1182 bp        

>NTDB_id=203438 BLD33_RS01490 WP_057992590.1 286220..287401(+) (kpsS) [Campylobacter coli strain WA333]
ATGAAATTTAGCGATAAGATTAAAAAAGAATTTAGCGGTAAAACTGTCTTGCTTTTACAAGGACCTGTAGGGACTTTTTT
TCACCGCCTTGCCATAAAGATGAAAAAAAATAAAACCAAAGTTTTTAAGCTTAATTTTAATGGAGGGGATTTTCTTTTCT
ATCCAAGTGGAAAAAGGTGCAAGTGCGACGAAAAGGATCTTGAAAATTTTTATGAGAGCTTTTTTAAAGAAAAAAAGATA
GATGCTATTGTGATGTATAATGATTGCCGTTTGATCCATGCAAAAGCTATCAAAGTAGCTAAGGGGCTTGGCATTGGTAT
TTGGATTTTTGAAGAGGGGTATTTAAGGCCTTATTGTATCACTTTTGAAAAAGATGGGGTCAATGCAAACTCCTCCTTGC
CTCGCGATAAAAATTTCTATCTTTCTTGCAATATCCTTACAAAAGAAAGCATAAAAGAAATTCCAGGTGGTTTTAAATTT
ATGGCCTTTAGTACTTTTCTGTATTGGCTTTTTTCTTTTCTGCTAGCTCCTTTTTTTAACAACAAGCTTCATCATCGCAC
CTTATATCCTTTTGAATTTTTATTTTGGTTTAGATCTTTATATAGAAAATACCTTTATAAATTCACAGAAAAAAAACTCA
ATCAAAAAATTTATAGCCTTGAAAAAAAGTATTTTTTGGCTATTTTGCAAGTTTATAATGATACGCAAATTAAGTACCAT
TATAAAAAAAGCATAGAAGAATTTATAGAAGAGCTTATCCTTTCTTTTGCAAATCACGCAAGAGCAAAGTCTTATCTTAT
CTTTAAACATCATCCTATGGATAGGGGATATAGAAATTATTCTAAACTTATAAATGAGCTAAGCCAAAAATACCATGTAG
AAGGAAGAATTTTATATGTGCACGATACTTATTTACCCACTCTTTTAAAAAAGGCTTTGGGTTGCATCACGATTAATTCT
ACAGTGGGTTTAAGTGCTATTTTAGAGGGTTGTCCTACTAAGGTTTGTGGAAATGCATTTTACAATTTTGAAGGCCTAGC
TTATCCAAAAAAACTTCAATTTTTTTGGCGCGAAGCTCATGCTTATAAACCCAATCCTAGCTTGGTTATAAATTTTAAAA
ATTATCTTTTAAATACAAATCAATTCAACGGCAATTTTTACAAAAATTCGTTTTTAGGTTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A5T1ZLR7

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kpsS Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

88.265

99.746

0.88


Multiple sequence alignment