Detailed information NTG0020343

Bioinformatically predicted

Overview

• Name: sepM
• Type: Regulator
• Locus tag: SMA_0516
• Genome accession: HE613569
• Coordinates: 524962..526047 (+)
• Length: 361 a.a.
• NCBI ID: CCF01807.1
• Uniprot ID: -
• Organism: Streptococcus macedonicus ACA-DC 198
• Function: processing of CSP (predicted from homology) Competence regulation

Genomic Context

Location: 519962..531047

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SMA_0510	-	520311..521526 (+)	1216	CCF01801.1	ABC transporter membrane-spanning permease-macrolide efflux	-
SMA_0511	asnA	521898..522890 (+)	993	CCF01802.1	Aspartate--ammonia ligase	-
SMA_0512	-	523024..523593 (-)	570	CCF01803.1	Hypothetical protein	-
SMA_0513	-	523627..523782 (-)	156	CCF01804.1	Hypothetical protein	-
SMA_0514	ylbH	523906..524454 (+)	549	CCF01805.1	Ribosomal RNA small subunit methyltransferase D	-
SMA_0515	coaD	524487..524984 (+)	498	CCF01806.1	Phosphopantetheine adenylyltransferase	-
SMA_0516	sepM	524962..526047 (+)	1086	CCF01807.1	Lon-like protease with PDZ domain	Regulator
SMA_0517	-	526176..526430 (+)	255	CCF01808.1	Hypothetical protein	-
SMA_0518	insI1	526500..526991 (-)	492	CCF01809.1	ISSth4, transposase, IS30 family, truncated	-
SMA_0519	-	527055..527189 (+)	135	CCF01810.1	Aquaporin Z	-
SMA_0520	aqpZ	527341..527661 (+)	321	CCF01811.1	Aquaporin Z	-
SMA_0521	-	527875..528384 (+)	510	CCF01812.1	Hypothetical protein	-
SMA_0522	yunD	528497..529822 (+)	1326	CCF01813.1	5'-nucleotidase family protein in cluster with NagD-like phosphatase	-
SMA_0523	yutD	529854..530432 (+)	579	CCF01814.1	Hypothetical protein	-

Sequence

Protein

• Length: 361 a.a.
• Molecular weight: 39123.86 Da
• Isoelectric Point: 4.1372

>NTDB_id=20343 SMA_0516 CCF01807.1 524962..526047(+) (sepM) [Streptococcus macedonicus ACA-DC 198]
MAILKRFKEILKKLGRILYRFKWWILGVVGIAFLLFSLLYPLDYYIEMPGGVYDIRSVLTVDNKEDDEDGSYNFVAVKVS
QATLAQLVYAWLTPYTEISTAADVTGGYSNADYLRINEYYMETSQNTATYQALTLAGKEATLDYQGVYVLNVSDNSTFKG
ILNIADTVTGVNGQTFNSSAELMAYVADLDLGSEVTVQYTSDGEAKEATGKIIELSNGKNGIGIGLVDHTSVSSDVDVDF
HTSGVGGPSAGLMFTLDIYDQLNGEDLRKGRKIAGTGTIESDGSVGDIGGAALKVVAAAKAGADIFFVPNNPVDEETLKK
DPDAKTNYEEAVEAAKDLDTDMKIVPVTTVQEAIDYLRNND

Nucleotide

• Length: 1086 bp

>NTDB_id=20343 SMA_0516 CCF01807.1 524962..526047(+) (sepM) [Streptococcus macedonicus ACA-DC 198]
ATGGCAATCTTAAAAAGATTTAAAGAGATTTTGAAAAAGTTGGGTCGTATTTTATATCGCTTTAAGTGGTGGATATTAGG
TGTTGTAGGCATTGCTTTCTTACTATTTAGCTTGTTGTATCCGCTTGATTACTATATTGAAATGCCTGGTGGTGTTTATG
ATATTCGTAGCGTTTTAACAGTTGATAATAAGGAAGATGATGAAGATGGCTCTTATAATTTTGTGGCTGTCAAGGTTAGT
CAGGCGACCTTGGCACAATTGGTTTATGCTTGGTTAACTCCCTACACAGAAATTTCGACAGCCGCAGATGTGACTGGTGG
TTATAGCAATGCTGATTATCTTCGTATCAATGAGTATTACATGGAAACCTCTCAAAATACAGCGACTTATCAAGCCTTAA
CCTTGGCAGGAAAGGAAGCGACGCTTGATTATCAAGGGGTTTATGTTTTAAATGTTAGTGATAATTCGACGTTTAAAGGG
ATTTTGAATATCGCTGATACGGTAACTGGGGTTAATGGTCAGACATTTAACAGTTCGGCAGAATTAATGGCCTATGTGGC
TGATTTGGATTTAGGGTCTGAGGTAACAGTTCAATATACATCAGACGGCGAAGCAAAAGAAGCCACAGGGAAAATTATTG
AATTGTCAAATGGAAAAAATGGTATCGGAATCGGTTTGGTAGATCATACGTCGGTGTCATCAGATGTTGATGTTGATTTT
CATACGAGTGGTGTCGGTGGTCCAAGTGCTGGTTTGATGTTTACGCTTGATATTTATGACCAATTAAATGGTGAAGATTT
GCGTAAAGGTCGTAAAATTGCTGGTACAGGTACGATTGAATCAGATGGTTCAGTCGGGGATATTGGTGGCGCAGCACTCA
AAGTTGTTGCTGCTGCTAAAGCTGGTGCGGATATTTTCTTTGTTCCAAATAACCCTGTGGATGAGGAAACATTGAAAAAA
GATCCTGATGCGAAAACGAACTATGAAGAAGCTGTCGAAGCTGCTAAAGACCTCGATACCGATATGAAAATCGTCCCAGT
CACAACGGTCCAAGAAGCAATTGACTATCTACGAAACAATGATTAA

Domains

Predicted by InterproScan.

• Lon protease (S16) C-terminal proteolytic domain (Lon_C) (246-323)

• PDZ domain (PDZ_2) (145-209)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
sepM	Streptococcus mutans UA159	67.742	94.46	0.64