Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | BLD39_RS04115 | Genome accession | NZ_CP017871 |
| Coordinates | 783118..783423 (-) | Length | 101 a.a. |
| NCBI ID | WP_002783353.1 | Uniprot ID | A0A401BKG4 |
| Organism | Campylobacter coli strain BP3183 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 778118..788423
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BLD39_RS04080 (BLD39_04080) | - | 778533..779294 (+) | 762 | WP_072212081.1 | ATP-binding protein | - |
| BLD39_RS04085 (BLD39_04085) | - | 779291..779974 (+) | 684 | WP_002791740.1 | 3-methyladenine DNA glycosylase | - |
| BLD39_RS04090 (BLD39_04090) | thiD | 779974..780786 (+) | 813 | WP_002797568.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| BLD39_RS04095 (BLD39_04095) | thiE | 780776..781408 (+) | 633 | WP_038853805.1 | thiamine phosphate synthase | - |
| BLD39_RS04100 (BLD39_04100) | - | 781386..782015 (+) | 630 | WP_002824854.1 | uroporphyrinogen-III synthase | - |
| BLD39_RS04105 (BLD39_04105) | - | 782008..782460 (-) | 453 | WP_002777117.1 | hypothetical protein | - |
| BLD39_RS04110 (BLD39_04110) | - | 782457..783125 (-) | 669 | WP_071304912.1 | hypothetical protein | - |
| BLD39_RS04115 (BLD39_04115) | ctsT | 783118..783423 (-) | 306 | WP_002783353.1 | hypothetical protein | Machinery gene |
| BLD39_RS04120 (BLD39_04120) | proC | 783420..784157 (-) | 738 | WP_052779178.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| BLD39_RS04125 (BLD39_04125) | fliW | 784157..784546 (-) | 390 | WP_002777093.1 | flagellar assembly protein FliW | - |
| BLD39_RS04130 (BLD39_04130) | - | 784710..785357 (+) | 648 | WP_002780248.1 | outer membrane protein assembly factor BamD | - |
| BLD39_RS04135 (BLD39_04135) | lon | 785373..787748 (+) | 2376 | WP_057031133.1 | endopeptidase La | - |
| BLD39_RS04140 (BLD39_04140) | rpsR | 787805..788065 (-) | 261 | WP_002777087.1 | 30S ribosomal protein S18 | - |
Sequence
Protein
Download Length: 101 a.a. Molecular weight: 12395.26 Da Isoelectric Point: 6.4746
>NTDB_id=203425 BLD39_RS04115 WP_002783353.1 783118..783423(-) (ctsT) [Campylobacter coli strain BP3183]
MKVAFSLLELILCIIILGLIFTSISKLFYQLNDNHDYLNYFERLYTLQDKLYTNPHQRDIKLHIQNLKTFDFKENFVNDN
IFQFKKLHIQNQDYSLYFYDE
MKVAFSLLELILCIIILGLIFTSISKLFYQLNDNHDYLNYFERLYTLQDKLYTNPHQRDIKLHIQNLKTFDFKENFVNDN
IFQFKKLHIQNQDYSLYFYDE
Nucleotide
Download Length: 306 bp
>NTDB_id=203425 BLD39_RS04115 WP_002783353.1 783118..783423(-) (ctsT) [Campylobacter coli strain BP3183]
ATGAAAGTTGCATTCTCGCTTTTAGAATTAATTCTTTGTATAATTATCCTAGGATTAATTTTTACAAGTATCTCTAAATT
ATTTTATCAGCTAAATGACAATCATGATTATTTAAATTATTTTGAAAGATTATACACACTGCAAGATAAACTTTATACCA
ATCCTCATCAAAGAGATATAAAACTTCATATACAGAATTTAAAAACTTTTGATTTTAAAGAAAACTTTGTAAATGATAAT
ATCTTTCAATTTAAAAAATTACATATTCAAAATCAAGATTACTCCCTATATTTTTACGATGAATAA
ATGAAAGTTGCATTCTCGCTTTTAGAATTAATTCTTTGTATAATTATCCTAGGATTAATTTTTACAAGTATCTCTAAATT
ATTTTATCAGCTAAATGACAATCATGATTATTTAAATTATTTTGAAAGATTATACACACTGCAAGATAAACTTTATACCA
ATCCTCATCAAAGAGATATAAAACTTCATATACAGAATTTAAAAACTTTTGATTTTAAAGAAAACTTTGTAAATGATAAT
ATCTTTCAATTTAAAAAATTACATATTCAAAATCAAGATTACTCCCTATATTTTTACGATGAATAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
50 |
97.03 |
0.485 |