Detailed information NTG0203397

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: BLD37_RS03775
• Genome accession: NZ_CP017868
• Coordinates: 709684..710643 (-)
• Length: 319 a.a.
• NCBI ID: WP_071314963.1
• Uniprot ID: A0A5T1ZRZ8
• Organism: Campylobacter coli strain MG1116
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 704684..715643

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BLD37_RS03745 (BLD37_03745)	-	705648..705848 (+)	201	WP_002777240.1	cbb3-type cytochrome oxidase assembly protein	-
BLD37_RS03750 (BLD37_03750)	-	705878..706177 (-)	300	WP_002777238.1	cytochrome c	-
BLD37_RS03755 (BLD37_03755)	-	706254..706814 (+)	561	WP_057980451.1	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	-
BLD37_RS03760 (BLD37_03760)	rfaD	706815..707768 (+)	954	WP_002787746.1	ADP-glyceromanno-heptose 6-epimerase	-
BLD37_RS03765 (BLD37_03765)	rfaE1	707761..709146 (+)	1386	WP_057980450.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
BLD37_RS03770 (BLD37_03770)	gmhA	709143..709703 (+)	561	WP_002780618.1	D-sedoheptulose 7-phosphate isomerase	-
BLD37_RS03775 (BLD37_03775)	waaF	709684..710643 (-)	960	WP_071314963.1	lipopolysaccharide heptosyltransferase II	Regulator
BLD37_RS03780 (BLD37_03780)	-	710702..711520 (+)	819	WP_002780620.1	glycosyltransferase family 2 protein	-
BLD37_RS03785 (BLD37_03785)	-	711532..712659 (+)	1128	WP_002780621.1	polysaccharide pyruvyl transferase family protein	-
BLD37_RS03790 (BLD37_03790)	-	712979..713176 (-)	198	Protein_734	glycosyltransferase family 2 protein	-
BLD37_RS03795 (BLD37_03795)	-	713182..714802 (-)	1621	Protein_735	glycosyltransferase family 2 protein	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36734.32 Da
• Isoelectric Point: 10.3767

>NTDB_id=203397 BLD37_RS03775 WP_071314963.1 709684..710643(-) (waaF) [Campylobacter coli strain MG1116]
MKIFIHLPTWLGDAVMASPALYAIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKQSRYKQALSLRKELGKIDLSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLNTKAHFKDLKLPFKLKFQNPLILRNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEIVIFGAGKAEQKLCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHISAVYKVKTVAIFGPTKFTQTSPWQNENAKLVYLDLACMPCMQKTCPLKHHKCMKDLKPQRVIEEARNLLKNPHL

Nucleotide

• Length: 960 bp

>NTDB_id=203397 BLD37_RS03775 WP_071314963.1 709684..710643(-) (waaF) [Campylobacter coli strain MG1116]
ATGAAAATTTTTATACATCTTCCCACTTGGCTAGGCGACGCAGTGATGGCTTCACCTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATGCCCAATTTATCCTTTATGGATCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAATCCCGCTACAAACAAGCCCTATCTTTACGCAAAGAACTTGGTAAAATCGATCTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCCAAGATTATCTTACATATTCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTAATACAAAAGCTCATTTTAAGGACTTAA
AACTTCCATTTAAGCTAAAATTTCAAAACCCTCTTATCTTAAGAAATGGTAAAAAAATTCTAGGACTCAACCCTGGTGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAAATTGT
AATCTTTGGCGCAGGAAAAGCCGAACAAAAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGACCTATGCACATAAGTGCGGTTTATAAGGTAAAAACCGTGGCTATTTTTGGCCCTACGAAATTTACCCAAACTTCACC
TTGGCAAAATGAAAACGCAAAATTAGTGTATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGTCCTTTAAAAC
ACCACAAATGTATGAAAGATTTAAAGCCTCAAAGGGTTATAGAAGAAGCTAGAAATTTACTTAAAAACCCTCATCTATGA

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (94-294)

3D structure

• AlphaFold DB: A0A5T1ZRZ8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	94.357	100	0.944