Detailed information
Bioinformatically predicted
Overview
| Name | waaF | Type | Regulator |
| Locus tag | BLD35_RS03820 | Genome accession | NZ_CP017865 |
| Coordinates | 721067..722011 (-) | Length | 314 a.a. |
| NCBI ID | WP_002777230.1 | Uniprot ID | A0A3Z8C350 |
| Organism | Campylobacter coli strain YF2105 | ||
| Function | repress natural transformation (predicted from homology) Competence regulation |
||
Genomic Context
Location: 716067..727011
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BLD35_RS03785 (BLD35_03785) | - | 716259..716459 (+) | 201 | WP_002777240.1 | cbb3-type cytochrome oxidase assembly protein | - |
| BLD35_RS03790 (BLD35_03790) | - | 716489..716788 (-) | 300 | WP_002777238.1 | cytochrome c | - |
| BLD35_RS03795 (BLD35_03795) | - | 716865..717428 (+) | 564 | WP_057031147.1 | D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase | - |
| BLD35_RS03800 (BLD35_03800) | rfaD | 717425..718378 (+) | 954 | WP_057031145.1 | ADP-glyceromanno-heptose 6-epimerase | - |
| BLD35_RS03805 (BLD35_03805) | rfaE1 | 718371..719756 (+) | 1386 | WP_038853886.1 | D-glycero-beta-D-manno-heptose-7-phosphate kinase | - |
| BLD35_RS03810 (BLD35_03810) | gmhA | 719753..720313 (+) | 561 | WP_002831598.1 | D-sedoheptulose 7-phosphate isomerase | - |
| BLD35_RS03815 (BLD35_03815) | - | 720313..721074 (+) | 762 | WP_002826801.1 | glycosyltransferase family 25 protein | - |
| BLD35_RS03820 (BLD35_03820) | waaF | 721067..722011 (-) | 945 | WP_002777230.1 | lipopolysaccharide heptosyltransferase II | Regulator |
| BLD35_RS03825 (BLD35_03825) | - | 722070..722891 (+) | 822 | WP_032685539.1 | glycosyltransferase family 2 protein | - |
| BLD35_RS09935 | - | 723232..723378 (-) | 147 | WP_168848228.1 | hypothetical protein | - |
| BLD35_RS09860 (BLD35_03830) | - | 723375..723611 (-) | 237 | WP_255296982.1 | alpha-2,3-sialyltransferase | - |
| BLD35_RS09940 | - | 723619..723932 (-) | 314 | Protein_741 | alpha-2,3-sialyltransferase | - |
| BLD35_RS03840 (BLD35_03840) | - | 724060..724860 (+) | 801 | WP_002777224.1 | class I SAM-dependent methyltransferase | - |
| BLD35_RS03845 (BLD35_03845) | - | 724941..725876 (+) | 936 | WP_002777223.1 | glycosyltransferase family 2 protein | - |
Sequence
Protein
Download Length: 314 a.a. Molecular weight: 36065.60 Da Isoelectric Point: 10.2686
>NTDB_id=203372 BLD35_RS03820 WP_002777230.1 721067..722011(-) (waaF) [Campylobacter coli strain YF2105]
MKVFIHLPTWLGDAVMASPALYGVYHYFKNAEFILYGSFVSTALFKEFPNAKIIVENKKSRYKQALSLRKKLGKIDLALS
FRSALSSKIILHILKVKQRYFFNKYDFKEEHQVLKYLYFIENSLEIKAHSKDLKLPFKLKFQNPIVLKNGKKILGLNPGA
SFGSAKRWDASYFAQVALNFSKTHEILIFGAGKAEQELCDEIFHILKEKNVKVKNLCNKTTIKTLCQNIVFCDIFITNDS
GPMHIAAAYKTKTIAIFGPTKFTQTSPWQNQNAKLVHLNLSCMPCMQKTCPLKHHRCMKDLKPEKILEAIQNFT
MKVFIHLPTWLGDAVMASPALYGVYHYFKNAEFILYGSFVSTALFKEFPNAKIIVENKKSRYKQALSLRKKLGKIDLALS
FRSALSSKIILHILKVKQRYFFNKYDFKEEHQVLKYLYFIENSLEIKAHSKDLKLPFKLKFQNPIVLKNGKKILGLNPGA
SFGSAKRWDASYFAQVALNFSKTHEILIFGAGKAEQELCDEIFHILKEKNVKVKNLCNKTTIKTLCQNIVFCDIFITNDS
GPMHIAAAYKTKTIAIFGPTKFTQTSPWQNQNAKLVHLNLSCMPCMQKTCPLKHHRCMKDLKPEKILEAIQNFT
Nucleotide
Download Length: 945 bp
>NTDB_id=203372 BLD35_RS03820 WP_002777230.1 721067..722011(-) (waaF) [Campylobacter coli strain YF2105]
ATGAAAGTTTTTATCCATCTTCCCACTTGGCTAGGCGATGCAGTCATGGCCTCACCTGCTTTATATGGAGTTTATCATTA
TTTTAAAAATGCTGAATTTATCCTTTATGGATCTTTTGTATCTACAGCGCTTTTTAAGGAATTTCCTAATGCTAAAATCA
TTGTAGAAAATAAAAAATCACGCTACAAACAAGCCCTTTCTTTACGCAAAAAACTTGGAAAAATCGATCTAGCCCTTTCT
TTTAGATCAGCCCTTTCCTCCAAGATCATTTTACACATCCTTAAGGTAAAACAAAGATATTTTTTTAACAAATATGATTT
TAAAGAAGAACATCAGGTTTTAAAATATCTTTATTTTATAGAAAATTCATTAGAAATTAAAGCTCATTCTAAGGATTTAA
AACTTCCTTTTAAATTAAAATTTCAAAATCCTATTGTTTTAAAAAATGGCAAAAAAATCCTAGGATTAAACCCTGGAGCG
AGTTTTGGAAGTGCTAAAAGATGGGATGCGAGCTATTTTGCACAAGTTGCTTTAAATTTTAGCAAAACTCATGAAATTTT
GATTTTTGGAGCAGGTAAAGCAGAACAAGAACTTTGCGATGAAATTTTTCATATACTAAAAGAAAAAAATGTCAAAGTAA
AAAATCTTTGCAATAAAACCACTATCAAAACCCTTTGTCAAAATATCGTTTTTTGTGATATTTTCATCACAAACGATAGC
GGCCCTATGCACATAGCTGCCGCTTATAAAACAAAAACCATAGCTATTTTTGGGCCTACTAAATTTACCCAAACCTCACC
TTGGCAAAATCAAAATGCAAAATTAGTACATCTAAATTTATCTTGCATGCCTTGCATGCAAAAAACCTGTCCTTTAAAAC
ATCATCGGTGCATGAAAGATTTAAAACCGGAAAAAATTTTAGAAGCAATCCAAAATTTTACTTAA
ATGAAAGTTTTTATCCATCTTCCCACTTGGCTAGGCGATGCAGTCATGGCCTCACCTGCTTTATATGGAGTTTATCATTA
TTTTAAAAATGCTGAATTTATCCTTTATGGATCTTTTGTATCTACAGCGCTTTTTAAGGAATTTCCTAATGCTAAAATCA
TTGTAGAAAATAAAAAATCACGCTACAAACAAGCCCTTTCTTTACGCAAAAAACTTGGAAAAATCGATCTAGCCCTTTCT
TTTAGATCAGCCCTTTCCTCCAAGATCATTTTACACATCCTTAAGGTAAAACAAAGATATTTTTTTAACAAATATGATTT
TAAAGAAGAACATCAGGTTTTAAAATATCTTTATTTTATAGAAAATTCATTAGAAATTAAAGCTCATTCTAAGGATTTAA
AACTTCCTTTTAAATTAAAATTTCAAAATCCTATTGTTTTAAAAAATGGCAAAAAAATCCTAGGATTAAACCCTGGAGCG
AGTTTTGGAAGTGCTAAAAGATGGGATGCGAGCTATTTTGCACAAGTTGCTTTAAATTTTAGCAAAACTCATGAAATTTT
GATTTTTGGAGCAGGTAAAGCAGAACAAGAACTTTGCGATGAAATTTTTCATATACTAAAAGAAAAAAATGTCAAAGTAA
AAAATCTTTGCAATAAAACCACTATCAAAACCCTTTGTCAAAATATCGTTTTTTGTGATATTTTCATCACAAACGATAGC
GGCCCTATGCACATAGCTGCCGCTTATAAAACAAAAACCATAGCTATTTTTGGGCCTACTAAATTTACCCAAACCTCACC
TTGGCAAAATCAAAATGCAAAATTAGTACATCTAAATTTATCTTGCATGCCTTGCATGCAAAAAACCTGTCCTTTAAAAC
ATCATCGGTGCATGAAAGATTTAAAACCGGAAAAAATTTTAGAAGCAATCCAAAATTTTACTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| waaF | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
83.067 |
99.682 |
0.828 |