Detailed information NTG0020335

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: SMA_0357
• Genome accession: HE613569
• Coordinates: 368780..369709 (+)
• Length: 309 a.a.
• NCBI ID: CCF01648.1
• Uniprot ID: -
• Organism: Streptococcus macedonicus ACA-DC 198
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 363780..374709

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SMA_0353	oppA	364000..365655 (+)	1656	CCF01644.1	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA	-
SMA_0354	oppB	365766..366680 (+)	915	CCF01645.1	Oligopeptide transport system permease protein OppB	-
SMA_0355	dppC	366691..367722 (+)	1032	CCF01646.1	Oligopeptide transport system permease protein OppC	-
SMA_0356	oppD	367734..368780 (+)	1047	CCF01647.1	Oligopeptide transport ATP-binding protein OppD	Regulator
SMA_0357	amiF	368780..369709 (+)	930	CCF01648.1	Oligopeptide transport ATP-binding protein OppF	Regulator

Sequence

Protein

• Length: 309 a.a.
• Molecular weight: 35071.80 Da
• Isoelectric Point: 5.4462

>NTDB_id=20335 SMA_0357 CCF01648.1 368780..369709(+) (amiF) [Streptococcus macedonicus ACA-DC 198]
MTENRKKLVELKNVSLTFNEGKKNEVKAIDNISFDIYEGEVFGLVGESGSGKTTVGRAILKLYDINKGEIDFDGETISHL
KGKELHEFRKNAQMIFQDPQASLNGRMKIRDIVAEGLDIHKLVNSKEERDQKVQDLLALVGLNKDHSTRYPHEFSGGQRQ
RIGIARALAVEPKFIIADEPISALDVSIQAQVVNLMQKLQREQGLTYLFIAHDLSMVKYISDRIGVMHWGKMLEIGTSDD
VYNHPIHPYTKSLLTAIPEPDPESERNRIHEEYDPSAELDGQPREMREITPGHFVFCTEAEAEVYKQEL

Nucleotide

• Length: 930 bp

>NTDB_id=20335 SMA_0357 CCF01648.1 368780..369709(+) (amiF) [Streptococcus macedonicus ACA-DC 198]
ATGACTGAAAATAGAAAAAAGCTTGTTGAACTTAAAAATGTATCATTGACTTTTAACGAAGGTAAAAAGAACGAAGTAAA
AGCTATTGATAATATCAGTTTTGATATTTACGAAGGTGAAGTTTTCGGTCTTGTTGGAGAATCAGGTTCTGGTAAGACAA
CTGTTGGTCGTGCTATTTTGAAATTGTACGACATTAATAAAGGTGAAATTGATTTTGATGGTGAAACTATCTCTCATCTT
AAAGGGAAAGAACTGCACGAATTCCGTAAAAATGCTCAAATGATTTTCCAAGACCCACAAGCTAGTCTTAATGGTCGTAT
GAAAATTCGTGACATTGTTGCGGAAGGACTTGACATCCATAAATTAGTTAACAGTAAAGAAGAACGTGACCAAAAAGTTC
AAGATTTACTTGCTTTAGTTGGACTTAACAAAGACCATTCAACACGCTATCCACATGAATTTTCAGGTGGACAACGTCAA
CGTATTGGTATCGCTCGTGCTCTTGCTGTTGAACCAAAGTTCATCATTGCCGATGAACCAATTTCAGCCCTTGACGTGTC
AATCCAAGCTCAAGTTGTTAACCTTATGCAAAAACTTCAAAGAGAACAGGGGTTAACATATCTCTTTATCGCTCACGATT
TGTCAATGGTTAAATACATCTCAGATCGTATTGGGGTTATGCACTGGGGTAAAATGCTTGAAATTGGAACATCTGATGAT
GTCTATAATCATCCAATTCACCCATATACTAAGAGCTTATTGACCGCAATTCCAGAACCAGACCCAGAATCTGAAAGAAA
TCGTATCCATGAAGAATACGATCCAAGTGCAGAACTAGATGGTCAACCACGTGAAATGCGTGAAATTACACCTGGCCACT
TTGTTTTTTGTACAGAAGCAGAAGCAGAAGTTTATAAACAAGAATTATAA

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-272)

• ABC transporter (ABC_tran) (30-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMD-9	54.426	98.706	0.537
amiF	Streptococcus salivarius strain HSISS4	54.426	98.706	0.537
amiF	Streptococcus thermophilus LMG 18311	54.098	98.706	0.534