Detailed information NTG0203340

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: BLD34_RS05775
• Genome accession: NZ_CP017863
• Coordinates: 1092624..1093583 (+)
• Length: 319 a.a.
• NCBI ID: WP_002876195.1
• Uniprot ID: -
• Organism: Campylobacter jejuni strain IF1100
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1087624..1098583

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BLD34_RS05750 (BLD34_05750)	-	1087973..1088995 (-)	1023	WP_002876190.1	hypothetical protein	-
BLD34_RS05755 (BLD34_05755)	-	1089066..1089839 (+)	774	WP_002866160.1	glycosyltransferase family 25 protein	-
BLD34_RS05760 (BLD34_05760)	wlaTB	1089832..1090788 (+)	957	WP_002860237.1	class E lipooligosaccharide biosynthesis protein WlaTB	-
BLD34_RS05765 (BLD34_05765)	wlaTC	1090785..1091744 (+)	960	WP_002876191.1	class E lipooligosaccharide biosynthesis protein WlaTC	-
BLD34_RS05770 (BLD34_05770)	-	1091747..1092565 (-)	819	WP_002876193.1	glycosyltransferase family 2 protein	-
BLD34_RS05775 (BLD34_05775)	waaF	1092624..1093583 (+)	960	WP_002876195.1	lipopolysaccharide heptosyltransferase II	Regulator
BLD34_RS05780 (BLD34_05780)	gmhA	1093564..1094124 (-)	561	WP_002876196.1	D-sedoheptulose 7-phosphate isomerase	-
BLD34_RS05785 (BLD34_05785)	rfaE1	1094121..1095506 (-)	1386	WP_002910336.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
BLD34_RS05790 (BLD34_05790)	rfaD	1095499..1096452 (-)	954	WP_002886910.1	ADP-glyceromanno-heptose 6-epimerase	-
BLD34_RS05795 (BLD34_05795)	gmhB	1096453..1097014 (-)	562	Protein_1132	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
BLD34_RS05800 (BLD34_05800)	-	1097095..1097397 (+)	303	WP_002852762.1	cytochrome c	-
BLD34_RS05805 (BLD34_05805)	ccoS	1097420..1097626 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36607.08 Da
• Isoelectric Point: 10.2870

>NTDB_id=203340 BLD34_RS05775 WP_002876195.1 1092624..1093583(+) (waaF) [Campylobacter jejuni strain IF1100]
MKIFIHLPTWLGDAVMASPALYAIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKQSRYKQALSLRKELGKIDLSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLSIKAHSKDLKLPFKLKLQDPLVLKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKSEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHISAVYKVKTVAIFGPTKFTQTSPWQNENAILVHLDLACMPCMQKTCPLKHHKCMKDLKPQRVIEEARNLLKNSHR

Nucleotide

• Length: 960 bp

>NTDB_id=203340 BLD34_RS05775 WP_002876195.1 1092624..1093583(+) (waaF) [Campylobacter jejuni strain IF1100]
ATGAAAATTTTTATACATCTTCCCACTTGGCTGGGCGATGCAGTGATGGCTTCACCTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATGCCCAATTTATCCTTTATGGCTCTTTAGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAATCTCGCTATAAACAAGCCCTATCTTTACGCAAAGAACTTGGTAAGATCGATCTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTGCATATCCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTAGTATAAAAGCTCATTCTAAAGACTTAA
AGCTTCCCTTTAAGCTAAAACTTCAAGACCCTCTTGTCTTAAAAAATGGTAAAAAAATTCTAGGACTCAATCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAAATTTT
AATCTTTGGCGCAGGAAAATCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAACAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGTCCTATGCACATAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATGAAAACGCAATATTAGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATCTAAAGCCTCAAAGGGTTATAGAAGAGGCTAGAAATTTACTTAAAAACTCTCATCGATGA

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (94-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	94.025	99.687	0.937