Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | BLD34_RS05415 | Genome accession | NZ_CP017863 |
| Coordinates | 1022416..1022718 (+) | Length | 100 a.a. |
| NCBI ID | WP_002875928.1 | Uniprot ID | - |
| Organism | Campylobacter jejuni strain IF1100 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1017416..1027718
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BLD34_RS05390 (BLD34_05390) | rpsR | 1017779..1018039 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| BLD34_RS05395 (BLD34_05395) | lon | 1018099..1020474 (-) | 2376 | WP_002852988.1 | endopeptidase La | - |
| BLD34_RS05400 (BLD34_05400) | - | 1020491..1021138 (-) | 648 | WP_002860191.1 | outer membrane protein assembly factor BamD | - |
| BLD34_RS05405 (BLD34_05405) | fliW | 1021299..1021688 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| BLD34_RS05410 (BLD34_05410) | proC | 1021688..1022419 (+) | 732 | WP_002859150.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| BLD34_RS05415 (BLD34_05415) | ctsT | 1022416..1022718 (+) | 303 | WP_002875928.1 | hypothetical protein | Machinery gene |
| BLD34_RS05420 (BLD34_05420) | - | 1022715..1023377 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| BLD34_RS05425 (BLD34_05425) | - | 1023374..1023826 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| BLD34_RS05430 (BLD34_05430) | hemD | 1023823..1024452 (-) | 630 | WP_002869541.1 | uroporphyrinogen-III synthase | - |
| BLD34_RS05435 (BLD34_05435) | thiE | 1024430..1025062 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| BLD34_RS05440 (BLD34_05440) | thiD | 1025052..1025864 (-) | 813 | WP_002869542.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| BLD34_RS05445 (BLD34_05445) | - | 1025861..1026547 (-) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| BLD34_RS05450 (BLD34_05450) | - | 1026544..1027305 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12161.32 Da Isoelectric Point: 9.0653
>NTDB_id=203338 BLD34_RS05415 WP_002875928.1 1022416..1022718(+) (ctsT) [Campylobacter jejuni strain IF1100]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFKRLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFKRLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=203338 BLD34_RS05415 WP_002875928.1 1022416..1022718(+) (ctsT) [Campylobacter jejuni strain IF1100]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTAAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTAAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
98 |
100 |
0.98 |