Detailed information NTG0203317

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: BLD38_RS06680
• Genome accession: NZ_CP017862
• Coordinates: 1246273..1247223 (+)
• Length: 316 a.a.
• NCBI ID: WP_002884485.1
• Uniprot ID: -
• Organism: Campylobacter jejuni strain FJ3124
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1241273..1252223

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BLD38_RS06655 (BLD38_06655)	-	1241346..1242896 (+)	1551	WP_002867216.1	glycosyltransferase	-
BLD38_RS06660 (BLD38_06660)	-	1242968..1243372 (-)	405	WP_071319703.1	hypothetical protein	-
BLD38_RS09540 (BLD38_06665)	-	1243353..1244471 (-)	1119	WP_079864998.1	glycosyltransferase family 2 protein	-
BLD38_RS06670 (BLD38_06670)	-	1244464..1245351 (-)	888	WP_052777644.1	glycosyltransferase	-
BLD38_RS06675 (BLD38_06675)	waaV	1245405..1246214 (-)	810	WP_002884487.1	glycosyltransferase family 2 protein	-
BLD38_RS06680 (BLD38_06680)	waaF	1246273..1247223 (+)	951	WP_002884485.1	lipopolysaccharide heptosyltransferase II	Regulator
BLD38_RS06685 (BLD38_06685)	-	1247209..1247973 (-)	765	WP_002884483.1	glycosyltransferase family 25 protein	-
BLD38_RS06690 (BLD38_06690)	gmhA	1247973..1248533 (-)	561	WP_002869619.1	D-sedoheptulose 7-phosphate isomerase	-
BLD38_RS06695 (BLD38_06695)	rfaE1	1248530..1249915 (-)	1386	WP_002884480.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
BLD38_RS06700 (BLD38_06700)	rfaD	1249908..1250861 (-)	954	WP_071319704.1	ADP-glyceromanno-heptose 6-epimerase	-
BLD38_RS06705 (BLD38_06705)	gmhB	1250862..1251423 (-)	562	Protein_1293	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
BLD38_RS06710 (BLD38_06710)	-	1251504..1251806 (+)	303	WP_002852762.1	cytochrome c	-
BLD38_RS06715 (BLD38_06715)	ccoS	1251829..1252035 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 316 a.a.
• Molecular weight: 36240.79 Da
• Isoelectric Point: 10.2878

>NTDB_id=203317 BLD38_RS06680 WP_002884485.1 1246273..1247223(+) (waaF) [Campylobacter jejuni strain FJ3124]
MKIFIHLPTWLGDAVMASPALYVIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKQSRYKQALSLRKELGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLHIKAHLKDLKLPFKLKFQSPLVLKNGKKILGLNPGA
SFGNAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHISAVYKVKTVAIFGPTKFTQTSPWQNENATLVHLNLACMPCMQKTCPLKHHKCMKDLKPEVIVKAIQNLTNI

Nucleotide

• Length: 951 bp

>NTDB_id=203317 BLD38_RS06680 WP_002884485.1 1246273..1247223(+) (waaF) [Campylobacter jejuni strain FJ3124]
ATGAAAATTTTTATACACCTTCCCACTTGGCTAGGCGATGCGGTGATGGCTTCACCTGCTTTATACGTTATAAAAGAACA
TTTTAAAAATGCTCAATTTATCCTTTATGGATCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAATCCCGCTACAAACAAGCCCTATCTTTACGCAAAGAACTTGGTAAGATCGATTTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTACATATTCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTCACATAAAAGCTCACCTTAAAGACTTAA
AACTTCCCTTTAAGCTAAAATTTCAAAGCCCTCTTGTCTTAAAAAATGGCAAAAAAATTCTAGGACTCAATCCTGGTGCA
AGCTTTGGAAATGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAGATTTT
AATCTTTGGCGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACTACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGCCCTATGCACATAAGTGCAGTTTATAAGGTAAAAACCGTGGCTATTTTTGGCCCTACAAAATTTACTCAAACCTCACC
TTGGCAAAATGAAAACGCAACATTAGTGCATTTAAATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAGCCTGAAGTGATTGTAAAAGCGATTCAAAATTTAACTAATATCTAA

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (96-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	92.332	99.051	0.915