Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | BLD38_RS06370 | Genome accession | NZ_CP017862 |
| Coordinates | 1184000..1184188 (+) | Length | 62 a.a. |
| NCBI ID | WP_195182296.1 | Uniprot ID | - |
| Organism | Campylobacter jejuni strain FJ3124 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1179000..1189188
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BLD38_RS06345 (BLD38_06345) | rpsR | 1179362..1179622 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| BLD38_RS06350 (BLD38_06350) | lon | 1179683..1182058 (-) | 2376 | WP_002885146.1 | endopeptidase La | - |
| BLD38_RS06355 (BLD38_06355) | - | 1182075..1182722 (-) | 648 | WP_012006727.1 | outer membrane protein assembly factor BamD | - |
| BLD38_RS06360 (BLD38_06360) | fliW | 1182883..1183272 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| BLD38_RS06365 (BLD38_06365) | proC | 1183272..1184003 (+) | 732 | WP_002859150.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| BLD38_RS06370 (BLD38_06370) | ctsT | 1184000..1184188 (+) | 189 | WP_195182296.1 | hypothetical protein | Machinery gene |
| BLD38_RS06375 (BLD38_06375) | - | 1184286..1184948 (+) | 663 | WP_002859149.1 | hypothetical protein | - |
| BLD38_RS06380 (BLD38_06380) | - | 1184945..1185397 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| BLD38_RS06385 (BLD38_06385) | hemD | 1185394..1186023 (-) | 630 | WP_002859147.1 | uroporphyrinogen-III synthase | - |
| BLD38_RS06390 (BLD38_06390) | thiE | 1186001..1186633 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| BLD38_RS06395 (BLD38_06395) | thiD | 1186623..1187435 (-) | 813 | WP_002885404.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| BLD38_RS06400 (BLD38_06400) | - | 1187432..1188118 (-) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| BLD38_RS06405 (BLD38_06405) | - | 1188115..1188876 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 62 a.a. Molecular weight: 7586.08 Da Isoelectric Point: 8.3159
>NTDB_id=203315 BLD38_RS06370 WP_195182296.1 1184000..1184188(+) (ctsT) [Campylobacter jejuni strain FJ3124]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFIKLQP
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFIKLQP
Nucleotide
Download Length: 189 bp
>NTDB_id=203315 BLD38_RS06370 WP_195182296.1 1184000..1184188(+) (ctsT) [Campylobacter jejuni strain FJ3124]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTATCAAACTTCAGCCTTAA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTATCAAACTTCAGCCTTAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
98.246 |
91.935 |
0.903 |