Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   BLD42_RS07215 Genome accession   NZ_CP017860
Coordinates   1371544..1372512 (+) Length   322 a.a.
NCBI ID   WP_071311307.1    Uniprot ID   A0A5Z5DMU4
Organism   Campylobacter jejuni strain TS1218     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1366544..1377512
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BLD42_RS07190 (BLD42_07190) cdsA 1367455..1368180 (-) 726 WP_071311306.1 phosphatidate cytidylyltransferase -
  BLD42_RS07195 (BLD42_07195) - 1368189..1368527 (-) 339 WP_002852397.1 hypothetical protein -
  BLD42_RS07200 (BLD42_07200) - 1368529..1369836 (-) 1308 WP_052789964.1 NFACT family protein -
  BLD42_RS07205 (BLD42_07205) mobA 1369898..1370473 (+) 576 WP_002867312.1 molybdenum cofactor guanylyltransferase -
  BLD42_RS07210 (BLD42_07210) pldA 1370470..1371458 (+) 989 Protein_1397 phospholipase A -
  BLD42_RS07215 (BLD42_07215) ceuB 1371544..1372512 (+) 969 WP_071311307.1 ABC transporter permease Machinery gene
  BLD42_RS07220 (BLD42_07220) ceuC 1372505..1373443 (+) 939 WP_038816948.1 iron chelate uptake ABC transporter family permease subunit -
  BLD42_RS07225 (BLD42_07225) ceuD 1373440..1374195 (+) 756 WP_071311308.1 ABC transporter ATP-binding protein -
  BLD42_RS07230 (BLD42_07230) ceuB 1374208..1375200 (+) 993 WP_002867307.1 enterochelin ABC transporter substrate-binding protein CeuB -
  BLD42_RS07240 (BLD42_07240) - 1375426..1375980 (-) 555 WP_043012925.1 membrane protein -

Sequence

Protein


Download         Length: 322 a.a.        Molecular weight: 35485.40 Da        Isoelectric Point: 9.6678

>NTDB_id=203293 BLD42_RS07215 WP_071311307.1 1371544..1372512(+) (ceuB) [Campylobacter jejuni strain TS1218]
MFFKHILSLKVLIALLLFFGMISLFIGVISINVKDILNLNSTQLEIITLTRIPRLIAILLTGMSLSICGLIMQQLTQNKF
VSPTTAGTMDCAKFGILISLIFFTGASFFTQTIIASVFALLGSFIFIQILRKIKLKDVIFVPLIGLMFGGIISAITTFFA
YALNYIQNIQGWLQGSMANVMQGNYELLYISLPLFILAYFLAHKITIVGMGEDIALNLGISYNGILFLGLMIVSIITSLV
IVSVGIIPFLGLIIPNLVALYLGDNLRKNLIYIALCGALFLLVCDIISRLVIFPFEMPLSITTGVLGSLIFIFLLLKRKV
YA

Nucleotide


Download         Length: 969 bp        

>NTDB_id=203293 BLD42_RS07215 WP_071311307.1 1371544..1372512(+) (ceuB) [Campylobacter jejuni strain TS1218]
TTGTTTTTTAAGCATATATTGAGTTTAAAAGTGCTTATAGCTTTACTTTTATTCTTTGGAATGATAAGTTTATTTATAGG
AGTTATCAGTATCAATGTAAAAGATATCCTTAATCTTAACTCCACTCAACTAGAAATCATAACCCTTACAAGAATTCCTA
GACTTATAGCAATTTTACTCACAGGAATGAGTCTTAGTATATGCGGGCTTATCATGCAACAACTCACGCAAAATAAATTC
GTTTCTCCAACTACGGCAGGAACTATGGATTGTGCTAAATTTGGCATACTTATTTCTTTAATATTTTTTACTGGAGCATC
TTTTTTCACTCAAACTATCATTGCTTCTGTATTTGCACTTTTGGGTTCTTTTATATTTATCCAAATTTTAAGAAAAATCA
AACTCAAAGATGTGATTTTTGTACCTTTGATAGGCTTGATGTTTGGAGGTATTATTAGTGCTATAACCACTTTTTTTGCC
TATGCTTTAAATTATATACAAAATATCCAAGGTTGGCTACAAGGCAGTATGGCAAATGTTATGCAGGGAAATTATGAATT
GCTCTACATTTCTTTACCACTTTTTATACTTGCTTATTTTTTAGCTCATAAAATTACCATAGTTGGCATGGGTGAAGATA
TAGCTTTAAATCTTGGAATTTCTTATAATGGGATATTATTTTTAGGCTTGATGATTGTAAGCATTATCACTAGTTTAGTG
ATTGTAAGCGTTGGGATTATCCCTTTTTTAGGGCTAATTATCCCAAATTTAGTAGCTCTTTATCTAGGTGATAATCTTAG
AAAAAATCTTATCTATATAGCACTTTGTGGAGCTTTGTTTTTACTTGTTTGCGATATCATTTCAAGACTTGTCATCTTTC
CTTTTGAAATGCCTTTAAGCATCACTACAGGTGTTTTAGGATCTTTAATCTTTATCTTTCTTTTGCTAAAAAGGAAAGTT
TATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(15-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5Z5DMU4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

99.068

100

0.991

Multiple sequence alignment