Detailed information
Bioinformatically predicted
Overview
| Name | waaF | Type | Regulator |
| Locus tag | BLD42_RS06220 | Genome accession | NZ_CP017860 |
| Coordinates | 1175038..1175997 (+) | Length | 319 a.a. |
| NCBI ID | WP_032586265.1 | Uniprot ID | A0A5Y8BL20 |
| Organism | Campylobacter jejuni strain TS1218 | ||
| Function | repress natural transformation (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1170038..1180997
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BLD42_RS06195 (BLD42_06195) | neuC | 1170625..1171749 (+) | 1125 | WP_071311287.1 | UDP-N-acetylglucosamine 2-epimerase | - |
| BLD42_RS06200 (BLD42_06200) | - | 1171742..1172284 (+) | 543 | Protein_1197 | beta-1,4-N-acetylgalactosaminyltransferase | - |
| BLD42_RS09950 | - | 1172359..1172691 (+) | 333 | WP_016818192.1 | hypothetical protein | - |
| BLD42_RS06205 (BLD42_06205) | - | 1172688..1173353 (+) | 666 | WP_002935341.1 | acylneuraminate cytidylyltransferase family protein | - |
| BLD42_RS06210 (BLD42_06210) | - | 1173477..1174109 (+) | 633 | WP_032580870.1 | CatB-related O-acetyltransferase | - |
| BLD42_RS06215 (BLD42_06215) | waaV | 1174173..1174979 (-) | 807 | WP_052805598.1 | glycosyltransferase family 2 protein | - |
| BLD42_RS06220 (BLD42_06220) | waaF | 1175038..1175997 (+) | 960 | WP_032586265.1 | glycosyltransferase family 9 protein | Regulator |
| BLD42_RS06225 (BLD42_06225) | gmhA | 1175978..1176538 (-) | 561 | WP_023890815.1 | D-sedoheptulose 7-phosphate isomerase | - |
| BLD42_RS06230 (BLD42_06230) | rfaE1 | 1176535..1177920 (-) | 1386 | WP_002896702.1 | D-glycero-beta-D-manno-heptose-7-phosphate kinase | - |
| BLD42_RS06235 (BLD42_06235) | rfaD | 1177913..1178866 (-) | 954 | WP_002872242.1 | ADP-glyceromanno-heptose 6-epimerase | - |
| BLD42_RS06240 (BLD42_06240) | gmhB | 1178863..1179427 (-) | 565 | Protein_1206 | D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase | - |
| BLD42_RS06245 (BLD42_06245) | - | 1179508..1179810 (+) | 303 | WP_002852762.1 | cytochrome c | - |
| BLD42_RS06250 (BLD42_06250) | ccoS | 1179833..1180039 (-) | 207 | WP_002852798.1 | cbb3-type cytochrome oxidase assembly protein CcoS | - |
Sequence
Protein
Download Length: 319 a.a. Molecular weight: 36740.49 Da Isoelectric Point: 10.3923
>NTDB_id=203288 BLD42_RS06220 WP_032586265.1 1175038..1175997(+) (waaF) [Campylobacter jejuni strain TS1218]
MKIFIHLPTWLGDAVMASLALYAIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKLSRYKQALSLRKELGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLVLKNGKKILGINPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKVEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTKFTQTSPWQNQNAKLVHLDLACMPCMQKICPLKHHKCMKDLKPKRVIEEARNLLKNPHL
MKIFIHLPTWLGDAVMASLALYAIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKLSRYKQALSLRKELGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLVLKNGKKILGINPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKVEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTKFTQTSPWQNQNAKLVHLDLACMPCMQKICPLKHHKCMKDLKPKRVIEEARNLLKNPHL
Nucleotide
Download Length: 960 bp
>NTDB_id=203288 BLD42_RS06220 WP_032586265.1 1175038..1175997(+) (waaF) [Campylobacter jejuni strain TS1218]
ATGAAAATTTTTATACATCTTCCCACTTGGCTAGGCGATGCAGTGATGGCTTCACTTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATGCTCAATTTATCCTTTATGGATCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACTATCCCGTTATAAACAAGCTCTATCTTTACGCAAAGAACTTGGTAAGATCGATTTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTACATATTCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTAGTATAAAAGCTCATTTTAAAGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTGTCTTAAAAAATGGCAAAAAAATTCTAGGAATCAACCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTAGCTTTAAATTTCAGCCAAAGTCATGAGATTTT
AATCTTTGGTGCAGGAAAAGTCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATTGCTTTTTGTGATCTTTTCATAACAAATGACAGT
GGTCCTATGCACCTAAGTGCGGTTTATAAGGTAAAAACCGTGGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATCAAAACGCAAAATTAGTACACTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAATCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAGCCTAAAAGGGTTATAGAAGAAGCTAGAAATTTACTTAAAAACCCTCATCTATAA
ATGAAAATTTTTATACATCTTCCCACTTGGCTAGGCGATGCAGTGATGGCTTCACTTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATGCTCAATTTATCCTTTATGGATCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACTATCCCGTTATAAACAAGCTCTATCTTTACGCAAAGAACTTGGTAAGATCGATTTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTACATATTCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTAGTATAAAAGCTCATTTTAAAGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTGTCTTAAAAAATGGCAAAAAAATTCTAGGAATCAACCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTAGCTTTAAATTTCAGCCAAAGTCATGAGATTTT
AATCTTTGGTGCAGGAAAAGTCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATTGCTTTTTGTGATCTTTTCATAACAAATGACAGT
GGTCCTATGCACCTAAGTGCGGTTTATAAGGTAAAAACCGTGGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATCAAAACGCAAAATTAGTACACTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAATCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAGCCTAAAAGGGTTATAGAAGAAGCTAGAAATTTACTTAAAAACCCTCATCTATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| waaF | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
94.044 |
100 |
0.94 |