Detailed information    

insolico Bioinformatically predicted

Overview


Name   kpsS   Type   Regulator
Locus tag   BLD41_RS07700 Genome accession   NZ_CP017859
Coordinates   1415835..1417019 (-) Length   394 a.a.
NCBI ID   WP_002871988.1    Uniprot ID   A0A381CRB9
Organism   Campylobacter jejuni strain YQ2210     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 1410835..1422019
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BLD41_RS07675 (BLD41_07675) fliL 1411984..1412520 (+) 537 WP_002868488.1 flagellar basal body-associated protein FliL -
  BLD41_RS07680 (BLD41_07680) acpS 1412520..1412867 (+) 348 WP_002825806.1 holo-ACP synthase -
  BLD41_RS07685 (BLD41_07685) - 1412868..1413287 (-) 420 WP_002780440.1 hypothetical protein -
  BLD41_RS07690 (BLD41_07690) - 1413284..1414645 (-) 1362 WP_002868489.1 cytochrome P450 -
  BLD41_RS07695 (BLD41_07695) - 1414642..1415763 (-) 1122 WP_002871987.1 hypothetical protein -
  BLD41_RS07700 (BLD41_07700) kpsS 1415835..1417019 (-) 1185 WP_002871988.1 capsule polysaccharide modification protein KpsS Regulator
  BLD41_RS07705 (BLD41_07705) kpsC 1417016..1419085 (-) 2070 WP_071450898.1 capsular polysaccharide biosynthesis protein -
  BLD41_RS07710 (BLD41_07710) cysC 1419082..1419594 (-) 513 WP_002818256.1 cytidine diphosphoramidate kinase -
  BLD41_RS07715 (BLD41_07715) - 1419584..1420345 (-) 762 WP_071450899.1 CTP:phosphoglutamine cytidylyltransferase -
  BLD41_RS07720 (BLD41_07720) - 1420347..1420949 (-) 603 WP_002825815.1 gamma-glutamyl-CDP-amidate hydrolase -

Sequence


Protein


Download         Length: 394 a.a.        Molecular weight: 46851.51 Da        Isoelectric Point: 9.9073

>NTDB_id=203268 BLD41_RS07700 WP_002871988.1 1415835..1417019(-) (kpsS) [Campylobacter jejuni strain YQ2210]
MRFSTKIKKEFSGKNVLLLQGPVGNFFHHLAVKMRKNQTKVFKLNFNGGDFFFYPSGTRCKCDEKDLENFYRDFFQNKKI
DAILMYNDCRIIHAKAIKVAKELGIEIWIFEEGYLRPYCITLEKDGVNANSSLPRDKNFYLSQNIFTKESIKEIPGGFKF
MAFDAFLYWLFAFILAPFFNNKLHHRTLYPFEFLFWFRSLYRKYLYKITEKKLNEKIYNLEKKYFLAILQVYSDTQIKYH
YKKSIEHFIEETILSFANHARAKSYLVFKHHPMDRGYKNYSKLINDLSQKYHVEGRVLYVHDTHLPVLLRKALGCITINS
TVGLSAILEGCPTKVCGNAFYDFEGLSYPKKLQFFWREAHAYKPNPVLVCNFKKYLLQTNQFNGNFYKNFFLDK

Nucleotide


Download         Length: 1185 bp        

>NTDB_id=203268 BLD41_RS07700 WP_002871988.1 1415835..1417019(-) (kpsS) [Campylobacter jejuni strain YQ2210]
ATGAGATTTAGCACTAAAATTAAAAAAGAATTTAGCGGTAAAAATGTTTTACTCTTGCAAGGGCCTGTGGGAAATTTTTT
TCATCATCTTGCAGTGAAAATGAGAAAAAACCAAACCAAAGTTTTTAAACTCAATTTTAACGGCGGAGATTTTTTTTTCT
ATCCTAGCGGAACGAGGTGTAAGTGTGATGAAAAAGATCTTGAAAATTTCTATAGAGATTTTTTTCAAAATAAAAAAATC
GATGCTATTTTAATGTATAATGATTGTCGCATTATACATGCTAAGGCTATTAAAGTGGCTAAAGAATTAGGAATTGAAAT
ATGGATTTTTGAAGAAGGATATTTAAGGCCTTATTGTATTACTTTGGAAAAAGATGGGGTGAATGCAAATTCTTCTTTAC
CGCGTGATAAAAATTTTTATCTTTCTCAAAATATTTTTACCAAAGAAAGCATAAAAGAAATTCCAGGTGGATTTAAATTT
ATGGCTTTTGATGCTTTTTTGTATTGGTTGTTTGCTTTTATTTTGGCTCCATTTTTTAACAACAAACTTCATCATCGCAC
TTTATATCCTTTTGAATTTTTATTTTGGTTTAGATCATTGTATAGAAAGTATCTTTATAAGATTACAGAAAAAAAACTAA
ATGAAAAGATTTATAATTTAGAAAAAAAGTACTTTTTGGCGATTTTACAAGTTTATAGTGATACGCAAATTAAATATCAT
TACAAAAAAAGCATAGAGCACTTTATAGAGGAAACCATACTTTCTTTTGCAAACCATGCAAGAGCTAAATCTTATCTAGT
TTTTAAACACCATCCCATGGATAGGGGCTATAAGAATTATTCTAAACTCATAAATGATTTAAGTCAAAAATATCATGTAG
AAGGAAGGGTTTTATATGTTCATGATACCCACTTGCCAGTTCTTTTAAGAAAGGCTTTGGGTTGTATTACTATAAATTCA
ACAGTAGGCCTTAGTGCTATTTTAGAAGGCTGTCCGACTAAGGTTTGTGGCAATGCTTTTTATGATTTTGAAGGCTTATC
TTATCCAAAAAAACTTCAATTTTTTTGGCGTGAAGCTCATGCTTATAAACCCAATCCTGTTTTAGTATGTAATTTTAAAA
AATATCTTTTACAAACTAATCAATTCAACGGCAATTTTTATAAAAATTTCTTTTTAGACAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A381CRB9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kpsS Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

99.239

100

0.992


Multiple sequence alignment