Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   BLD41_RS07400 Genome accession   NZ_CP017859
Coordinates   1352985..1353953 (+) Length   322 a.a.
NCBI ID   WP_002874446.1    Uniprot ID   A0AB36G4C9
Organism   Campylobacter jejuni strain YQ2210     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1347985..1358953
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BLD41_RS07375 (BLD41_07375) cdsA 1348895..1349620 (-) 726 WP_002889945.1 phosphatidate cytidylyltransferase -
  BLD41_RS07380 (BLD41_07380) - 1349629..1349967 (-) 339 WP_002852397.1 hypothetical protein -
  BLD41_RS07385 (BLD41_07385) - 1349969..1351276 (-) 1308 WP_002874448.1 NFACT family protein -
  BLD41_RS07390 (BLD41_07390) mobA 1351338..1351913 (+) 576 WP_002867312.1 molybdenum cofactor guanylyltransferase -
  BLD41_RS07395 (BLD41_07395) pldA 1351910..1352899 (+) 990 WP_002874447.1 phospholipase A -
  BLD41_RS07400 (BLD41_07400) ceuB 1352985..1353953 (+) 969 WP_002874446.1 ABC transporter permease Machinery gene
  BLD41_RS07405 (BLD41_07405) ceuC 1353946..1354884 (+) 939 WP_002854141.1 iron chelate uptake ABC transporter family permease subunit -
  BLD41_RS07410 (BLD41_07410) ceuD 1354881..1355636 (+) 756 WP_002867308.1 ABC transporter ATP-binding protein -
  BLD41_RS07415 (BLD41_07415) ceuB 1355649..1356641 (+) 993 WP_002867307.1 enterochelin ABC transporter substrate-binding protein CeuB -
  BLD41_RS07425 (BLD41_07425) - 1356867..1357421 (-) 555 WP_002867306.1 membrane protein -

Sequence

Protein


Download         Length: 322 a.a.        Molecular weight: 35455.37 Da        Isoelectric Point: 9.6678

>NTDB_id=203266 BLD41_RS07400 WP_002874446.1 1352985..1353953(+) (ceuB) [Campylobacter jejuni strain YQ2210]
MFFKHILSLKVLIALLLFFGMISLFIGVISINVKDILNLNSTQLEIITLTRIPRLIAILLTGMSLSICGLIMQQLTQNKF
VSPTTAGTMDCAKFGILISLIFFAGASFFTQTIIASVFALLGSFIFIQILRKIKLKDVIFVPLIGLMFGGIISAITTFFA
YALNYIQNIQGWLQGSMANVMQGNYELLYISLPLFILAYFLAHKITIVGMGEDIALNLGISYNGILFLGLMIVSIITSLV
IVSVGIIPFLGLIIPNLVALYLGDNLRKNLIYIALCGALFLLVCDIISRLVIFPFEMPLSITTGVLGSLIFIFLLLKRKV
YA

Nucleotide


Download         Length: 969 bp        

>NTDB_id=203266 BLD41_RS07400 WP_002874446.1 1352985..1353953(+) (ceuB) [Campylobacter jejuni strain YQ2210]
TTGTTTTTTAAGCATATATTGAGTTTAAAAGTGCTTATAGCTTTACTATTATTCTTTGGAATGATAAGTTTATTTATAGG
AGTTATCAGTATCAATGTAAAAGATATTCTTAATCTTAACTCCACTCAACTAGAAATCATAACTCTCACAAGAATTCCTA
GACTTATAGCGATTTTACTCACAGGAATGAGTCTTAGTATATGCGGGCTTATCATGCAACAACTCACGCAAAATAAATTC
GTTTCTCCAACTACAGCAGGAACTATGGATTGTGCTAAATTTGGCATACTTATTTCTTTAATATTTTTTGCTGGAGCGTC
TTTTTTTACTCAAACTATCATTGCTTCTGTATTTGCACTTTTGGGTTCTTTTATATTTATCCAAATTTTAAGAAAAATCA
AACTCAAAGATGTGATTTTTGTACCTTTGATAGGCTTGATGTTTGGAGGCATTATTAGTGCTATAACTACTTTTTTTGCC
TATGCTTTAAATTATATACAAAATATCCAAGGCTGGTTACAAGGCAGTATGGCAAATGTTATGCAAGGAAATTATGAATT
GCTCTACATTTCTTTACCACTTTTTATACTTGCTTATTTTTTAGCTCATAAAATCACCATAGTTGGCATGGGTGAAGATA
TAGCTTTAAATCTTGGAATTTCTTATAATGGTATATTATTTTTAGGCTTAATGATTGTAAGCATTATCACTAGCTTAGTG
ATTGTAAGCGTTGGGATTATCCCTTTTTTAGGGCTAATTATCCCAAATTTAGTAGCTCTTTATCTAGGTGATAATCTTAG
AAAAAATCTTATCTATATAGCACTTTGTGGAGCTTTGTTTTTACTTGTTTGCGATATCATTTCAAGACTTGTTATCTTTC
CTTTTGAAATGCCTTTAAGTATCACTACAGGTGTTTTAGGGTCTTTAATCTTTATCTTTCTTTTACTAAAAAGGAAAGTT
TATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(15-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

99.379

100

0.994

Multiple sequence alignment