Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   CJZ71_RS12105 Genome accession   NZ_CP022891
Coordinates   2250067..2250915 (-) Length   282 a.a.
NCBI ID   WP_003226832.1    Uniprot ID   P26497
Organism   Bacillus subtilis strain DKU_NT_03     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2245067..2255915
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CJZ71_RS12085 (CJZ71_12085) yyzM 2246344..2246550 (-) 207 WP_003226838.1 DUF951 family protein -
  CJZ71_RS12090 (CJZ71_12090) - 2246644..2247660 (-) 1017 WP_010886647.1 membrane protein -
  CJZ71_RS12095 (CJZ71_12095) yyaC 2248120..2248737 (+) 618 WP_003243890.1 spore protease YyaC -
  CJZ71_RS12100 (CJZ71_12100) - 2248854..2250004 (+) 1151 WP_087614170.1 IS3 family transposase -
  CJZ71_RS12105 (CJZ71_12105) spo0J 2250067..2250915 (-) 849 WP_003226832.1 stage 0 sporulation protein Spo0J Regulator
  CJZ71_RS12110 (CJZ71_12110) soj 2250908..2251669 (-) 762 WP_003219244.1 sporulation initiation inhibitor protein Soj -
  CJZ71_RS12115 (CJZ71_12115) yyaB 2251917..2252357 (+) 441 WP_014481510.1 PH domain-containing protein -
  CJZ71_RS12120 (CJZ71_12120) noc 2252408..2253259 (-) 852 WP_003226829.1 nucleoid occlusion protein -
  CJZ71_RS12125 (CJZ71_12125) rsmG 2253381..2254100 (-) 720 WP_069837911.1 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG -

Sequence

Protein


Download         Length: 282 a.a.        Molecular weight: 32210.16 Da        Isoelectric Point: 8.3881

>NTDB_id=202988 CJZ71_RS12105 WP_003226832.1 2250067..2250915(-) (spo0J) [Bacillus subtilis strain DKU_NT_03]
MAKGLGKGINALFNQVDLSEETVEEIKIADLRPNPYQPRKHFDDEALAELKESVLQHGILQPLIVRKSLKGYDIVAGERR
FRAAKLAGLDTVPAIVRELSEALMREIALLENLQREDLSPLEEAQAYDSLLKHLDLTQEQLAKRLGKSRPHIANHLRLLT
LPENIQQLIAEGTLSMGHGRTLLGLKNKNKLEPLVQKVIAEQLNVRQLEQLIQQLNQNVPRETKKKEPVKDAVLKERESY
LQNYFGTTVNIKRQKKKGKIEIEFFSNEDLDRILELLSERES

Nucleotide


Download         Length: 849 bp        

>NTDB_id=202988 CJZ71_RS12105 WP_003226832.1 2250067..2250915(-) (spo0J) [Bacillus subtilis strain DKU_NT_03]
ATGGCTAAAGGCCTTGGAAAAGGGATTAATGCGTTATTTAATCAGGTAGATTTGTCTGAAGAGACAGTTGAAGAAATTAA
AATTGCCGATTTACGCCCTAATCCTTATCAGCCAAGAAAACACTTTGATGACGAGGCATTAGCTGAACTAAAAGAATCTG
TGCTGCAGCATGGCATTCTTCAGCCGCTTATCGTCAGAAAATCTTTAAAAGGCTATGATATTGTTGCGGGTGAACGGCGT
TTTCGAGCGGCAAAGCTGGCAGGTTTAGATACAGTTCCGGCCATTGTCCGTGAATTATCAGAGGCGTTAATGAGGGAAAT
TGCTTTATTAGAAAATCTTCAGCGTGAAGATTTATCTCCGCTTGAAGAGGCTCAGGCATATGACTCCTTGTTGAAACACT
TAGATCTCACACAAGAGCAGCTTGCCAAACGTCTTGGGAAAAGCAGACCGCATATTGCGAATCATTTAAGACTGCTGACA
CTGCCAGAAAATATTCAGCAGCTTATTGCCGAAGGTACGCTTTCTATGGGACATGGACGCACGCTTCTTGGCTTAAAAAA
CAAAAATAAGCTTGAACCGCTGGTACAAAAAGTGATTGCGGAGCAGCTCAATGTTCGCCAGCTTGAGCAGCTGATTCAGC
AGTTGAATCAGAATGTTCCACGTGAAACAAAGAAAAAAGAACCTGTGAAAGATGCGGTTCTAAAAGAGCGAGAATCCTAT
CTCCAAAATTATTTTGGAACAACAGTTAATATTAAAAGACAGAAGAAAAAAGGCAAAATCGAAATTGAATTTTTCTCTAA
TGAAGACCTTGACCGGATTTTAGAGCTTTTGTCTGAACGAGAATCATAA

Domains

Predicted by InterProScan.

HTH domain found in ParB protein (HTH_ParB)

(163-214)

ParB/Sulfiredoxin domain (ParB_N)

(24-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  PDB 5NOC
  PDB 6SDK

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

41.923

92.199

0.387