Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   CJZ71_RS11820 Genome accession   NZ_CP022891
Coordinates   2202439..2203233 (-) Length   264 a.a.
NCBI ID   WP_003226939.1    Uniprot ID   A0ABU0V6L5
Organism   Bacillus subtilis strain DKU_NT_03     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2197439..2208233
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CJZ71_RS11790 (CJZ71_11790) - 2197571..2197981 (-) 411 WP_231560755.1 SdpA family antimicrobial peptide system protein -
  CJZ71_RS11795 (CJZ71_11795) - 2198309..2198944 (-) 636 WP_014481470.1 SdpI family protein -
  CJZ71_RS11800 (CJZ71_11800) - 2198944..2199228 (-) 285 WP_015715052.1 autorepressor SdpR family transcription factor -
  CJZ71_RS11805 (CJZ71_11805) rocR 2199455..2200840 (+) 1386 WP_003244510.1 arginine utilization regulatory protein RocR -
  CJZ71_RS11810 (CJZ71_11810) - 2200822..2200974 (-) 153 Protein_2337 ATP-binding protein -
  CJZ71_RS22450 - 2201002..2201134 (-) 133 Protein_2338 hypothetical protein -
  CJZ71_RS11815 (CJZ71_11815) htrA 2201155..2202357 (-) 1203 WP_046161071.1 serine protease HtrC Regulator
  CJZ71_RS11820 (CJZ71_11820) vicX 2202439..2203233 (-) 795 WP_003226939.1 MBL fold metallo-hydrolase Regulator
  CJZ71_RS11825 (CJZ71_11825) walI 2203255..2204097 (-) 843 WP_014481473.1 WalRK two-component regulatory system regulator WalI -
  CJZ71_RS11830 (CJZ71_11830) walH 2204084..2205451 (-) 1368 WP_069837942.1 WalRK two-component regulatory system regulator WalH -
  CJZ71_RS11835 (CJZ71_11835) walK 2205441..2207276 (-) 1836 WP_009968432.1 cell wall metabolism sensor histidine kinase WalK -
  CJZ71_RS11840 (CJZ71_11840) walR 2207284..2207991 (-) 708 WP_069837943.1 cell wall metabolism DNA-binding response regulator WalR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29283.28 Da        Isoelectric Point: 5.8036

>NTDB_id=202985 CJZ71_RS11820 WP_003226939.1 2202439..2203233(-) (vicX) [Bacillus subtilis strain DKU_NT_03]
MSLQFSVLASGSTGNAFYLETEDHAFLVDAGLSGKAMDGLMAQIGRKLDDVDGIFVTHEHSDHIKGLGVVARKYKLPIYA
NEKTWKAMENQIGKIDTDQKFVFPMETVKSFGGLDVESFGVSHDAAEPMFYVFHYNGRKLALMTDTGYVSDRMKGIIRSA
NVFVFESNHDVGMLQMGRYPWSIKRRILSDVGHVSNEDAALAMTDVIGDETSRIYLAHLSQDNNMKELARMSVQQTLASK
GFVTGETFDLYDTDPKKATPLCAV

Nucleotide


Download         Length: 795 bp        

>NTDB_id=202985 CJZ71_RS11820 WP_003226939.1 2202439..2203233(-) (vicX) [Bacillus subtilis strain DKU_NT_03]
ATGAGCTTGCAATTTAGCGTACTTGCGAGCGGGAGTACGGGAAATGCGTTTTACCTTGAAACAGAGGATCACGCATTTTT
AGTGGACGCCGGTTTGAGCGGGAAAGCCATGGATGGGCTGATGGCGCAGATCGGGCGTAAGCTGGATGATGTAGACGGCA
TTTTTGTGACGCATGAGCATAGTGACCATATTAAGGGCCTTGGTGTGGTCGCCAGAAAGTACAAGCTTCCGATCTATGCG
AATGAGAAGACTTGGAAAGCGATGGAGAATCAAATCGGGAAAATTGACACCGATCAAAAGTTTGTATTTCCGATGGAAAC
AGTGAAGTCGTTCGGCGGACTTGATGTTGAATCATTTGGCGTTTCCCACGATGCGGCCGAGCCGATGTTTTATGTATTCC
ATTATAACGGCCGAAAGCTCGCGTTAATGACAGATACGGGATATGTCAGCGACCGGATGAAAGGCATTATCCGTTCAGCG
AATGTGTTTGTGTTTGAAAGCAATCATGATGTCGGCATGCTGCAAATGGGAAGATACCCGTGGAGCATTAAGCGGCGGAT
TTTAAGTGACGTCGGGCACGTGTCAAATGAAGATGCTGCCTTGGCGATGACGGATGTCATTGGCGATGAGACGTCTCGTA
TTTACCTGGCGCATTTGAGCCAGGACAACAACATGAAGGAGCTGGCAAGAATGTCTGTGCAGCAGACATTGGCTTCTAAA
GGATTTGTGACGGGTGAGACATTTGACTTATACGACACCGATCCGAAGAAGGCCACTCCGCTTTGCGCTGTATAA

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(12-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

53.435

99.242

0.53