Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   CJZ71_RS08785 Genome accession   NZ_CP022891
Coordinates   1609957..1610670 (-) Length   237 a.a.
NCBI ID   WP_014481000.1    Uniprot ID   -
Organism   Bacillus subtilis strain DKU_NT_03     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1604957..1615670
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CJZ71_RS08765 (CJZ71_08765) ghrB 1605102..1606079 (+) 978 WP_072592561.1 D-glycerate dehydrogenase -
  CJZ71_RS08770 (CJZ71_08770) psdB 1606116..1608056 (-) 1941 WP_069837800.1 lantibiotic ABC transporter permease PsdB -
  CJZ71_RS08775 (CJZ71_08775) psdA 1608031..1608810 (-) 780 WP_069837801.1 lantibiotic ABC transporter ATP-binding protein PsdA -
  CJZ71_RS08780 (CJZ71_08780) psdS 1608893..1609963 (-) 1071 WP_003242699.1 two-component sensor histidine kinase PsdS -
  CJZ71_RS08785 (CJZ71_08785) braR 1609957..1610670 (-) 714 WP_014481000.1 two-component system response regulator PsdR Regulator
  CJZ71_RS08790 (CJZ71_08790) - 1610817..1611025 (+) 209 Protein_1735 hypothetical protein -
  CJZ71_RS08795 (CJZ71_08795) yvcN 1611061..1611825 (-) 765 WP_080480876.1 arylamine N-acetyltransferase -
  CJZ71_RS08800 (CJZ71_08800) crh 1611826..1612083 (-) 258 WP_003219835.1 HPr family phosphocarrier protein -
  CJZ71_RS08805 (CJZ71_08805) whiA 1612107..1613057 (-) 951 WP_003228147.1 DNA-binding protein WhiA -
  CJZ71_RS08810 (CJZ71_08810) mgfK 1613080..1614033 (-) 954 WP_069837939.1 gluconeogenesis morphogenetic factor -
  CJZ71_RS08815 (CJZ71_08815) rapZ 1614035..1614922 (-) 888 WP_003243903.1 RNase adapter RapZ -
  CJZ71_RS08820 (CJZ71_08820) rppI 1614947..1615423 (-) 477 WP_014481002.1 NUDIX domain-containing protein -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27541.46 Da        Isoelectric Point: 4.6774

>NTDB_id=202968 CJZ71_RS08785 WP_014481000.1 1609957..1610670(-) (braR) [Bacillus subtilis strain DKU_NT_03]
MYRILLVEDDERIASLLGGHLQKYGYEVKIAEQLNDIKLEFAEMKPDLVLLDINLPFFDGFYWCRQIRTISNAPIIFISA
RIDELNQVMAIENGGDDYITKPFHLEVVMAKIKSVLRRTYGEYSPSLPQESRIVELGGLTIYPDQNEAEWNSSRILFSQK
EFQLLSIFVREHKKIVSRDELLEALWDDVDFVDDNTLTVNVNRLRRKLENAGLKDCISTIRGQGYQFQVNRKDEAEC

Nucleotide


Download         Length: 714 bp        

>NTDB_id=202968 CJZ71_RS08785 WP_014481000.1 1609957..1610670(-) (braR) [Bacillus subtilis strain DKU_NT_03]
GTGTATCGGATTTTGCTTGTGGAAGATGATGAGCGGATTGCTTCTTTGCTGGGCGGTCATCTTCAAAAATACGGATATGA
AGTGAAAATTGCTGAACAGCTGAATGATATAAAATTGGAATTTGCAGAAATGAAGCCTGATCTTGTGCTGCTTGATATCA
ACCTGCCTTTTTTTGACGGATTTTATTGGTGCAGGCAAATCCGTACCATTTCCAATGCGCCGATTATCTTTATATCGGCA
CGGATCGATGAGCTGAATCAGGTAATGGCGATTGAAAATGGCGGCGATGATTATATCACAAAGCCGTTCCATCTAGAGGT
AGTGATGGCCAAAATCAAAAGCGTCCTGCGCCGCACATATGGTGAATATTCGCCCTCTTTGCCGCAGGAATCTAGAATAG
TGGAGCTTGGTGGGCTGACGATTTATCCTGATCAAAATGAGGCCGAATGGAACAGCTCCCGTATTCTGTTTTCCCAAAAA
GAATTTCAGCTTCTCTCTATTTTTGTGAGGGAGCATAAAAAAATTGTTTCTCGTGATGAACTATTGGAGGCGTTATGGGA
TGACGTTGATTTTGTCGATGACAATACGTTAACGGTCAATGTCAACCGGCTGCGGAGAAAACTGGAGAATGCCGGACTGA
AAGATTGCATTTCCACAATCAGAGGACAAGGCTATCAATTTCAAGTCAATCGGAAGGATGAAGCGGAGTGTTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(155-227)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

45.982

94.515

0.435