Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   CJZ71_RS05825 Genome accession   NZ_CP022891
Coordinates   1063740..1064435 (-) Length   231 a.a.
NCBI ID   WP_069837705.1    Uniprot ID   -
Organism   Bacillus subtilis strain DKU_NT_03     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1058740..1069435
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CJZ71_RS05805 (CJZ71_05805) yttA 1059167..1059913 (+) 747 Protein_1158 LMBR1 domain-containing protein -
  CJZ71_RS05810 (CJZ71_05810) bceB 1059950..1061890 (-) 1941 WP_069837704.1 bacitracin ABC transporter permease BceB -
  CJZ71_RS05815 (CJZ71_05815) bceA 1061880..1062641 (-) 762 WP_003229137.1 bacitracin ABC transporter ATP-binding protein BceA -
  CJZ71_RS05820 (CJZ71_05820) bceS 1062743..1063747 (-) 1005 WP_003229135.1 two-component sensor histidine kinase BceS -
  CJZ71_RS05825 (CJZ71_05825) braR 1063740..1064435 (-) 696 WP_069837705.1 two-component response regulator BceR Regulator
  CJZ71_RS05830 (CJZ71_05830) ytrF 1064532..1065842 (-) 1311 WP_069837706.1 ABC transporter permease YtrF -
  CJZ71_RS05835 (CJZ71_05835) ytrE 1065832..1066527 (-) 696 WP_014477726.1 ABC transporter ATP-binding protein YtrE -
  CJZ71_RS05840 (CJZ71_05840) ytrD 1066542..1067519 (-) 978 WP_014480623.1 ABC transporter permease YtrD -
  CJZ71_RS05845 (CJZ71_05845) - 1067551..1068537 (-) 987 WP_069837707.1 ABC transporter permease subunit -
  CJZ71_RS05850 (CJZ71_05850) ytrB 1068531..1069409 (-) 879 WP_003229123.1 ABC transporter ATP-binding protein YtrB -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 26909.77 Da        Isoelectric Point: 5.3731

>NTDB_id=202957 CJZ71_RS05825 WP_069837705.1 1063740..1064435(-) (braR) [Bacillus subtilis strain DKU_NT_03]
MFKLLLIEDDESLFHEIKDRLTGWSYDVYGIQDFSQVLQEFSAVNPDCVIIDVQLPKFDGFHWCRLIRSRSNVPILFLSS
RDHPADMVMSMQLGADDFIQKPFHFDVLIAKIQAMFRRVHHYNTEPNTIKTWCGAAVDAEQNLVSNDKGSVELTKNEMFI
LKQLIEQKNKIVSREELIRSLWNDERFVSDNTLTVNVNRLRKKLDALQLGAYIETKVGQGYIAKEEDKFYD

Nucleotide


Download         Length: 696 bp        

>NTDB_id=202957 CJZ71_RS05825 WP_069837705.1 1063740..1064435(-) (braR) [Bacillus subtilis strain DKU_NT_03]
TTGTTTAAACTTTTGCTGATTGAAGATGATGAATCGCTGTTTCATGAAATCAAGGATCGTTTAACGGGATGGTCCTATGA
TGTATACGGCATTCAGGATTTCAGTCAGGTGCTGCAGGAATTTTCGGCGGTTAATCCTGATTGTGTCATTATTGATGTAC
AGCTGCCTAAATTTGACGGCTTTCATTGGTGCCGGCTGATCCGCTCCCGGTCAAATGTTCCGATTCTCTTTTTATCCTCC
CGGGATCATCCTGCTGATATGGTGATGTCCATGCAGCTCGGGGCAGATGACTTTATTCAAAAGCCATTTCATTTTGATGT
GCTGATCGCGAAAATCCAAGCGATGTTCCGGCGTGTACACCATTATAATACGGAGCCGAATACGATTAAAACGTGGTGCG
GCGCTGCTGTAGACGCGGAGCAGAACCTCGTCAGCAATGACAAAGGATCTGTTGAACTGACCAAAAATGAAATGTTCATT
CTAAAACAATTAATAGAGCAAAAAAACAAGATCGTCAGCCGGGAAGAGCTGATCAGAAGCTTGTGGAACGATGAGCGTTT
TGTTAGTGATAATACGCTGACCGTCAATGTCAATCGCCTGCGAAAAAAACTGGACGCCCTGCAGCTTGGCGCATATATCG
AGACAAAGGTGGGCCAAGGCTACATCGCGAAGGAAGAGGACAAGTTCTATGATTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(150-222)

Response regulator receiver domain (Response_reg)

(5-113)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

39.545

95.238

0.377