Detailed information NTG0202940

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: CJZ71_RS03730
• Genome accession: NZ_CP022891
• Coordinates: 645065..646192 (-)
• Length: 375 a.a.
• NCBI ID: WP_014480328.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain DKU_NT_03
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 640065..651192

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CJZ71_RS22760 (CJZ71_03705)	-	640113..640325 (-)	213	Protein_735	recombinase family protein	-
CJZ71_RS03710 (CJZ71_03710)	fumC	640544..641932 (-)	1389	WP_014480325.1	class II fumarate hydratase	-
CJZ71_RS03715 (CJZ71_03715)	-	642099..642989 (+)	891	WP_014480326.1	LysR family transcriptional regulator	-
CJZ71_RS03720 (CJZ71_03720)	-	643931..644326 (+)	396	WP_014480327.1	VOC family protein	-
CJZ71_RS03730 (CJZ71_03730)	rapC	645065..646192 (-)	1128	WP_014480328.1	Rap family tetratricopeptide repeat protein	Regulator
CJZ71_RS23060 (CJZ71_03735)	-	646374..648300 (+)	1927	Protein_740	T7SS effector LXG polymorphic toxin	-
CJZ71_RS03740 (CJZ71_03740)	-	648314..648601 (+)	288	WP_014480331.1	hypothetical protein	-
CJZ71_RS03745 (CJZ71_03745)	-	649004..649444 (+)	441	WP_014480332.1	SMI1/KNR4 family protein	-
CJZ71_RS03750 (CJZ71_03750)	-	649543..649995 (+)	453	WP_014480333.1	SMI1/KNR4 family protein	-
CJZ71_RS03755 (CJZ71_03755)	cdiI	650092..650451 (+)	360	WP_014480334.1	ribonuclease toxin immunity protein CdiI	-
CJZ71_RS03760 (CJZ71_03760)	-	650556..651035 (+)	480	WP_224588637.1	hypothetical protein	-

Sequence

Protein

• Length: 375 a.a.
• Molecular weight: 44149.36 Da
• Isoelectric Point: 6.0289

>NTDB_id=202940 CJZ71_RS03730 WP_014480328.1 645065..646192(-) (rapC) [Bacillus subtilis strain DKU_NT_03]
MNPVLSSSEVGVKINEWYKMIRQFSVPDAEILKAEVEQEIQRMEEDEYLLIYFSLMKFRHQLMLDYLEPVTTRIRPTIEE
LLEKIETSNKGISGLLSYYSLFFRGMYEFDKKQYMKAIYYYREAEKQLIHVPDEIERAEFHFKLAEAYYGMKQSHVSMHH
VKQALDIYNQYELYKVRKVQCMFVISGNYTDFKHYEKSQPHLEKALKLSRELNNKRLISSALYNLGTNFADSGDYEQAEV
YIKQAVEITEKEKLTNLPHSLFSYAKILFKQGKMNEAIQVSKKGLSAALYQGDELFAKLQGYLNALYVDAVDQQGVNKTI
EYLEKNKNYSYIEDIACETAAAYANSKEFETSYVYHQKMLETQTQIQRGECLYDF

Nucleotide

• Length: 1128 bp

>NTDB_id=202940 CJZ71_RS03730 WP_014480328.1 645065..646192(-) (rapC) [Bacillus subtilis strain DKU_NT_03]
GTGAATCCGGTTTTATCATCGTCAGAAGTTGGCGTAAAGATCAATGAATGGTATAAAATGATACGTCAATTTAGTGTCCC
GGATGCAGAGATTTTAAAGGCAGAGGTCGAGCAAGAAATCCAACGGATGGAGGAAGATGAGTATTTACTCATTTACTTCT
CCTTAATGAAATTCCGTCATCAGCTCATGTTAGATTATTTGGAACCCGTAACGACACGTATAAGACCAACTATTGAGGAA
CTTCTTGAAAAAATTGAGACTTCAAATAAAGGCATATCTGGCCTGTTATCGTATTATTCTCTGTTTTTCAGAGGGATGTA
CGAGTTTGATAAGAAGCAATACATGAAAGCTATCTACTATTATAGAGAAGCCGAAAAGCAGCTTATACATGTCCCTGATG
AGATCGAAAGGGCAGAGTTTCATTTTAAGTTAGCTGAAGCATATTATGGTATGAAGCAAAGTCATGTGTCTATGCATCAC
GTTAAACAAGCGTTGGATATTTATAATCAATATGAACTTTATAAGGTGCGAAAAGTTCAATGTATGTTTGTTATCTCAGG
GAATTATACTGATTTTAAACATTACGAAAAAAGTCAGCCGCATCTTGAAAAGGCATTAAAGTTATCTAGGGAATTGAATA
ACAAAAGGTTGATTAGTTCTGCACTATATAATTTAGGCACTAATTTTGCTGACAGTGGTGATTACGAGCAGGCGGAAGTA
TACATAAAGCAAGCAGTGGAGATTACAGAAAAAGAAAAGCTCACAAACTTGCCACATTCTTTATTTTCTTATGCAAAAAT
CCTTTTTAAACAAGGAAAAATGAATGAGGCTATCCAAGTAAGTAAGAAAGGTTTGTCAGCAGCTCTTTATCAAGGTGATG
AGCTTTTCGCAAAATTACAGGGATATTTAAATGCTCTTTATGTCGATGCAGTGGACCAACAAGGTGTTAATAAAACCATA
GAATACTTAGAAAAAAATAAGAACTATTCATATATTGAAGACATTGCCTGTGAGACCGCAGCTGCTTACGCAAACTCAAA
AGAATTTGAAACATCCTATGTATATCATCAGAAAATGCTTGAGACTCAAACACAAATTCAAAGGGGAGAATGCCTGTATG
ACTTTTAA

Domains

Predicted by InterProScan.

• Tetratricopeptide repeat (TPR_12) (195-251)

• Tetratricopeptide repeat (TPR_8) (259-287)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	44.415	100	0.445
rapF	Bacillus subtilis subsp. subtilis str. 168	39.418	100	0.397