Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   BK049_RS04015 Genome accession   NZ_CP017786
Coordinates   792418..793209 (-) Length   263 a.a.
NCBI ID   WP_071167880.1    Uniprot ID   A0AAC9IEC1
Organism   Bacillus xiamenensis strain VV3     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 787418..798209
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BK049_RS03995 (BK049_03995) - 789858..790841 (-) 984 WP_008360610.1 glycosyltransferase family 2 protein -
  BK049_RS04000 (BK049_04000) - 791140..791412 (-) 273 WP_071167879.1 YfhJ family protein -
  BK049_RS04005 (BK049_04005) - 791529..791678 (+) 150 WP_003217849.1 small, acid-soluble spore protein K -
  BK049_RS18730 - 791704..791877 (+) 174 WP_008360604.1 YpzG family protein -
  BK049_RS04010 (BK049_04010) - 792100..792414 (-) 315 WP_008359305.1 YfhH family protein -
  BK049_RS04015 (BK049_04015) recX 792418..793209 (-) 792 WP_071167880.1 recombination regulator RecX Regulator
  BK049_RS04020 (BK049_04020) - 793304..794200 (+) 897 WP_071167881.1 TIGR01777 family oxidoreductase -
  BK049_RS04025 (BK049_04025) - 794254..794364 (+) 111 WP_017358836.1 YfhE family protein -
  BK049_RS04030 (BK049_04030) - 794426..794581 (+) 156 WP_008359302.1 YfhD family protein -
  BK049_RS04035 (BK049_04035) - 794620..795207 (-) 588 WP_071167882.1 nitroreductase -
  BK049_RS04040 (BK049_04040) - 795480..796736 (+) 1257 WP_008359300.1 transcriptional regulator -
  BK049_RS04045 (BK049_04045) - 796773..797240 (-) 468 WP_008359299.1 DUF393 domain-containing protein -
  BK049_RS04050 (BK049_04050) - 797581..798129 (-) 549 WP_008359296.1 thioredoxin family protein -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30656.08 Da        Isoelectric Point: 7.5049

>NTDB_id=202908 BK049_RS04015 WP_071167880.1 792418..793209(-) (recX) [Bacillus xiamenensis strain VV3]
MPYITKISAQKNNTERVNIFLDEKYAFSVDLDVLVQHDLKKGKELDEADIIEIQFGDAVKKGFQQAVDYLSYRMRSVKEV
TDYLTKKDIPAPAISEIIHKLKHYKYVNDLEFAEAYVNTHRKTNSKGPSVLKKELKLKGIDDDTIEQALSQYPNDLQLEE
AVKQVLKLVKKEKNRSAKEIEQRIKLQLQRKGFSFDIIDKALQEAYDGQEEEKEEEALHYMLEKAKRKVGYDGSFEKKMK
VKQFLYRKGFDLNTIDHVLDKGE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=202908 BK049_RS04015 WP_071167880.1 792418..793209(-) (recX) [Bacillus xiamenensis strain VV3]
ATGCCGTATATTACGAAAATTTCTGCTCAGAAAAACAATACAGAGCGCGTGAACATCTTTCTTGATGAAAAGTACGCGTT
TAGCGTGGATCTAGATGTGCTCGTCCAACACGATTTGAAAAAGGGGAAAGAACTGGACGAAGCCGATATCATAGAGATTC
AATTCGGTGATGCAGTGAAAAAAGGATTTCAGCAGGCCGTTGATTATTTATCCTATCGCATGAGATCGGTGAAGGAAGTC
ACCGATTATTTGACGAAAAAAGACATACCTGCACCTGCTATTAGTGAAATTATACACAAATTAAAGCATTACAAGTATGT
CAATGATCTTGAATTTGCTGAAGCATATGTGAACACTCACCGAAAAACGAACAGCAAAGGCCCGTCCGTCCTAAAAAAAG
AATTAAAGCTAAAAGGCATAGACGATGACACCATTGAACAAGCGCTATCGCAATATCCGAACGATTTGCAGCTAGAGGAA
GCTGTCAAACAAGTTCTCAAGCTTGTAAAGAAAGAGAAAAATCGTTCTGCAAAAGAGATTGAGCAGCGCATCAAGCTGCA
GCTTCAGCGCAAGGGATTTTCATTTGATATCATTGATAAAGCCCTTCAAGAAGCCTATGATGGACAAGAAGAGGAAAAGG
AAGAAGAAGCCCTCCACTATATGCTGGAGAAGGCAAAACGCAAGGTAGGATATGACGGGTCATTTGAAAAGAAGATGAAA
GTGAAGCAGTTTCTTTACCGGAAAGGCTTTGATCTTAATACAATTGATCACGTTTTAGACAAAGGGGAATGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

62.738

100

0.627

Multiple sequence alignment