Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   CJZ70_RS20300 Genome accession   NZ_CP022890
Coordinates   3874527..3875375 (+) Length   282 a.a.
NCBI ID   WP_003226832.1    Uniprot ID   P26497
Organism   Bacillus subtilis strain DKU_NT_02     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 3869527..3880375
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CJZ70_RS20280 (CJZ70_20280) rsmG 3871342..3872061 (+) 720 WP_014481512.1 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG -
  CJZ70_RS20285 (CJZ70_20285) noc 3872183..3873034 (+) 852 WP_003226829.1 nucleoid occlusion protein -
  CJZ70_RS20290 (CJZ70_20290) yyaB 3873085..3873525 (-) 441 WP_014481510.1 PH domain-containing protein -
  CJZ70_RS20295 (CJZ70_20295) soj 3873773..3874534 (+) 762 WP_003219244.1 sporulation initiation inhibitor protein Soj -
  CJZ70_RS20300 (CJZ70_20300) spo0J 3874527..3875375 (+) 849 WP_003226832.1 stage 0 sporulation protein Spo0J Regulator
  CJZ70_RS20310 (CJZ70_20310) yyaC 3876704..3877321 (-) 618 WP_095010798.1 spore protease YyaC -
  CJZ70_RS20315 (CJZ70_20315) - 3877781..3878797 (+) 1017 WP_010886647.1 membrane protein -
  CJZ70_RS20320 (CJZ70_20320) yyzM 3878891..3879097 (+) 207 WP_003226838.1 DUF951 family protein -

Sequence

Protein


Download         Length: 282 a.a.        Molecular weight: 32210.16 Da        Isoelectric Point: 8.3881

>NTDB_id=202907 CJZ70_RS20300 WP_003226832.1 3874527..3875375(+) (spo0J) [Bacillus subtilis strain DKU_NT_02]
MAKGLGKGINALFNQVDLSEETVEEIKIADLRPNPYQPRKHFDDEALAELKESVLQHGILQPLIVRKSLKGYDIVAGERR
FRAAKLAGLDTVPAIVRELSEALMREIALLENLQREDLSPLEEAQAYDSLLKHLDLTQEQLAKRLGKSRPHIANHLRLLT
LPENIQQLIAEGTLSMGHGRTLLGLKNKNKLEPLVQKVIAEQLNVRQLEQLIQQLNQNVPRETKKKEPVKDAVLKERESY
LQNYFGTTVNIKRQKKKGKIEIEFFSNEDLDRILELLSERES

Nucleotide


Download         Length: 849 bp        

>NTDB_id=202907 CJZ70_RS20300 WP_003226832.1 3874527..3875375(+) (spo0J) [Bacillus subtilis strain DKU_NT_02]
ATGGCTAAAGGCCTTGGAAAAGGGATTAATGCGTTATTTAATCAGGTCGATTTGTCTGAAGAGACAGTTGAAGAAATTAA
AATTGCCGATTTACGCCCTAATCCTTATCAGCCAAGAAAACACTTTGATGACGAGGCATTAGCTGAACTAAAAGAATCTG
TGCTGCAGCATGGCATTCTTCAGCCGCTTATCGTCAGAAAATCTTTAAAAGGCTATGATATTGTTGCGGGTGAACGGCGT
TTTCGAGCGGCAAAGCTGGCAGGTTTAGATACAGTTCCGGCCATTGTCCGTGAATTATCAGAGGCGTTAATGAGGGAAAT
TGCTTTATTAGAAAACCTTCAGCGTGAAGATTTATCTCCGCTTGAAGAGGCTCAGGCATATGACTCCTTGTTGAAACACT
TAGATCTCACACAAGAGCAGCTTGCCAAACGTCTTGGGAAAAGCAGACCGCATATTGCGAATCATTTAAGACTGCTGACA
CTGCCAGAAAATATTCAGCAGCTTATTGCCGAAGGTACGCTTTCTATGGGACATGGACGCACGCTTCTTGGCTTAAAAAA
CAAAAATAAGCTTGAACCGCTGGTACAAAAAGTGATTGCGGAGCAGCTCAATGTTCGCCAGCTTGAGCAGCTGATTCAGC
AGTTGAATCAGAATGTTCCACGTGAAACAAAGAAAAAAGAACCTGTGAAAGATGCGGTTCTAAAAGAACGGGAATCCTAT
CTCCAAAATTATTTTGGAACAACAGTTAATATTAAAAGACAGAAGAAAAAAGGCAAAATCGAAATTGAATTTTTCTCTAA
TGAAGACCTTGACCGGATTTTAGAGCTTTTGTCTGAACGAGAATCATAA

Domains

Predicted by InterProScan.

HTH domain found in ParB protein (HTH_ParB)

(163-214)

ParB/Sulfiredoxin domain (ParB_N)

(24-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  PDB 5NOC
  PDB 6SDK

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

41.923

92.199

0.387