Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   BK049_RS02615 Genome accession   NZ_CP017786
Coordinates   520110..521069 (-) Length   319 a.a.
NCBI ID   WP_008355270.1    Uniprot ID   A0AAC9IEP7
Organism   Bacillus xiamenensis strain VV3     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 515110..526069
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BK049_RS02585 (BK049_02585) - 515263..516243 (-) 981 WP_071167785.1 ABC transporter ATP-binding protein -
  BK049_RS02590 (BK049_02590) - 516411..517208 (-) 798 WP_008355281.1 DUF2268 domain-containing protein -
  BK049_RS02595 (BK049_02595) fabF 517286..518527 (-) 1242 WP_071167786.1 beta-ketoacyl-ACP synthase II -
  BK049_RS02600 (BK049_02600) - 518549..519487 (-) 939 WP_071167787.1 beta-ketoacyl-ACP synthase III -
  BK049_RS02605 (BK049_02605) - 519657..519890 (+) 234 WP_008355274.1 hypothetical protein -
  BK049_RS02610 (BK049_02610) comZ 519901..520098 (-) 198 WP_008355272.1 ComZ family protein Regulator
  BK049_RS02615 (BK049_02615) med 520110..521069 (-) 960 WP_008355270.1 BMP family ABC transporter substrate-binding protein Regulator
  BK049_RS02620 (BK049_02620) - 521160..521738 (-) 579 WP_008355268.1 hypothetical protein -
  BK049_RS02625 (BK049_02625) - 521814..522554 (-) 741 WP_008355266.1 hypothetical protein -
  BK049_RS02630 (BK049_02630) - 522728..523186 (-) 459 WP_071167788.1 DinB family protein -
  BK049_RS02635 (BK049_02635) - 523484..523678 (+) 195 WP_071167789.1 YjzD family protein -
  BK049_RS02640 (BK049_02640) - 523796..525061 (-) 1266 WP_071167790.1 MFS transporter -
  BK049_RS02645 (BK049_02645) - 525229..525408 (-) 180 WP_071167791.1 YjzC family protein -

Sequence

Protein


Download         Length: 319 a.a.        Molecular weight: 35680.54 Da        Isoelectric Point: 5.6694

>NTDB_id=202900 BK049_RS02615 WP_008355270.1 520110..521069(-) (med) [Bacillus xiamenensis strain VV3]
MKYQRLVMIFSFLLLLSACSQAPLKGHIEKVGLLVPDTINDQVWGTKGYKGLLNIQSTFGVDVYYKEGMVDKEKIVDAIE
EFHKKGVNLIIGHGNEYSEIFNLISEDYPKTQFITVNGGKPQADNVTNVTFKGEAMGFFGGMTAAHMSKTKKIGILATYD
WQSEVDGFIKGAKYQDAHVQVLAEFVENWDDADKAVNLYQKLKKQGVDVVYPAGDGYNIPVIEQIKNDNLSAIGYVTDQS
NLGSHTVLTSTVQHVDKAYSIIAKKFNEGKLNEGEYSFDFKEGVIEMGKFSSTIDRDFVKDIENDISYYKKTGKLPNEK

Nucleotide


Download         Length: 960 bp        

>NTDB_id=202900 BK049_RS02615 WP_008355270.1 520110..521069(-) (med) [Bacillus xiamenensis strain VV3]
ATGAAGTACCAACGGCTTGTCATGATCTTTTCGTTCCTTCTTTTATTATCTGCCTGCTCGCAGGCGCCTTTAAAAGGACA
TATTGAGAAGGTGGGTTTACTCGTCCCCGATACGATTAATGATCAAGTTTGGGGAACGAAAGGTTATAAAGGCTTATTAA
ATATCCAATCAACATTTGGTGTAGATGTTTATTATAAGGAAGGCATGGTCGACAAGGAGAAAATCGTTGATGCCATTGAA
GAGTTCCATAAAAAAGGAGTCAATTTGATTATTGGCCATGGCAATGAATACAGCGAAATTTTCAACTTGATCAGTGAAGA
TTATCCAAAAACACAATTTATTACGGTCAATGGAGGCAAGCCTCAGGCTGACAATGTCACAAACGTGACGTTTAAAGGAG
AAGCAATGGGCTTTTTCGGAGGCATGACTGCAGCACATATGTCCAAAACAAAAAAGATTGGTATTCTTGCTACATATGAT
TGGCAAAGCGAAGTAGACGGCTTTATCAAAGGGGCAAAATATCAAGACGCACATGTGCAAGTTCTAGCGGAATTTGTCGA
AAACTGGGATGATGCTGACAAAGCTGTGAACCTCTATCAAAAATTGAAAAAACAAGGTGTAGATGTTGTGTATCCAGCAG
GTGATGGTTATAATATCCCTGTCATTGAACAAATCAAAAACGACAATTTATCTGCGATCGGATATGTCACTGATCAATCG
AACCTTGGAAGCCATACCGTCTTAACCAGCACAGTACAGCATGTTGATAAAGCGTACAGTATCATTGCGAAGAAGTTTAA
TGAAGGCAAACTAAACGAAGGTGAATACTCCTTTGACTTTAAAGAAGGAGTGATCGAAATGGGTAAATTTAGCTCAACCA
TTGACCGCGATTTTGTGAAAGACATAGAGAATGATATCTCGTATTACAAAAAAACGGGCAAACTGCCTAATGAAAAGTGA

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(28-318)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

64.744

97.806

0.633

Multiple sequence alignment