Detailed information NTG0202896

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: CJZ70_RS18580
• Genome accession: NZ_CP022890
• Coordinates: 3542802..3543923 (-)
• Length: 373 a.a.
• NCBI ID: WP_069837225.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain DKU_NT_02
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3537802..3548923

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CJZ70_RS18560 (CJZ70_18560)	znuC	3538314..3539009 (-)	696	WP_014475714.1	zinc ABC transporter ATP-binding protein ZnuC	-
CJZ70_RS18565 (CJZ70_18565)	znuA	3539064..3540023 (-)	960	WP_003234733.1	metal ABC transporter substrate-binding protein	-
CJZ70_RS18570 (CJZ70_18570)	ycdG	3540210..3541895 (-)	1686	WP_031600124.1	alpha-glucosidase	-
CJZ70_RS18575 (CJZ70_18575)	ycdF	3541919..3542695 (-)	777	WP_014478742.1	SDR family oxidoreductase	-
CJZ70_RS18580 (CJZ70_18580)	rapF	3542802..3543923 (-)	1122	WP_069837225.1	response regulator aspartate phosphatase RapJ	Regulator
CJZ70_RS18585 (CJZ70_18585)	cwlK	3544046..3544549 (+)	504	WP_017695036.1	peptidoglycan L-alanyl-D-glutamate endopeptidase CwlK	-
CJZ70_RS18590 (CJZ70_18590)	ycdC	3544557..3545918 (-)	1362	WP_041340180.1	YcdB/YcdC domain-containing protein	-
CJZ70_RS18595 (CJZ70_18595)	ycdB	3546105..3547526 (-)	1422	WP_041335264.1	YcdB/YcdC domain-containing protein	-
CJZ70_RS21280	-	3547700..3547831 (+)	132	WP_003246334.1	hypothetical protein	-
CJZ70_RS18600 (CJZ70_18600)	ycdA	3547900..3548919 (+)	1020	WP_049832648.1	DUF4352 domain-containing protein	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 44354.20 Da
• Isoelectric Point: 4.8344

>NTDB_id=202896 CJZ70_RS18580 WP_069837225.1 3542802..3543923(-) (rapF) [Bacillus subtilis strain DKU_NT_02]
MRAKIPSEEVAVKLNEWYKLIRAFEADQAEALKQEIEYDLEDMEENQDLLLYFSLMEFRHRIMLDKLMPVKDSDTKPPFS
DMLNEIESNQQKLTGLLEYYFYYFRGMYEFKQKNFILAIDHYKHAEEKLEYVEDEIEKAEFLFKVAEVYYHIKQTYFSMN
YASQALDIYTKYELYGRRRVQCEFIIAGNLTDVYHHEKALTHLCSALDHARQLEEAYMIAAAYYNVGHCKYSLGDYKEAE
GYFKTAAAIFEEHNFQQAVQAVFSLTHIYCKEGKYDKAAEAYDRGIKSAAEWEDDMYLTKFRLIHELYLGSGDLNVLTEC
FDLLESRQLLADAEDLLHDTAERFNQLEHYESAAFFYRRLLNIKKKLAEQRFQ

Nucleotide

• Length: 1122 bp

>NTDB_id=202896 CJZ70_RS18580 WP_069837225.1 3542802..3543923(-) (rapF) [Bacillus subtilis strain DKU_NT_02]
ATGAGAGCAAAGATTCCATCAGAAGAAGTAGCAGTAAAGCTGAATGAATGGTACAAGCTCATTCGCGCATTTGAAGCAGA
TCAAGCAGAAGCGTTAAAGCAGGAGATTGAATACGATTTAGAAGATATGGAAGAGAACCAGGACTTGCTTTTATATTTTT
CTTTGATGGAATTCCGGCATCGAATCATGCTTGATAAGCTGATGCCGGTGAAAGACAGCGACACCAAGCCTCCGTTCTCT
GATATGCTGAACGAAATTGAAAGCAATCAGCAAAAACTCACGGGCTTACTGGAATACTACTTTTATTATTTCAGAGGAAT
GTACGAATTCAAGCAGAAAAATTTCATATTAGCGATCGACCATTATAAACATGCCGAGGAAAAGCTCGAGTATGTCGAGG
ATGAGATCGAAAAAGCTGAGTTTCTTTTTAAAGTCGCAGAAGTGTATTATCACATCAAACAAACGTATTTTTCCATGAAT
TATGCGAGCCAGGCGCTTGATATCTATACGAAATATGAGCTGTACGGTCGCCGCCGGGTTCAGTGTGAATTTATCATCGC
CGGAAATTTGACCGATGTGTATCATCATGAAAAAGCACTGACCCACTTGTGCAGCGCTTTAGATCATGCCAGGCAGCTTG
AAGAAGCGTACATGATCGCCGCTGCCTATTATAATGTCGGACACTGTAAGTACAGTCTGGGTGACTACAAAGAAGCGGAG
GGCTATTTCAAAACAGCCGCCGCCATTTTTGAGGAGCACAACTTTCAGCAAGCTGTTCAAGCTGTATTTTCACTGACCCA
TATCTACTGTAAAGAGGGAAAATACGACAAGGCAGCAGAGGCATATGATCGCGGGATAAAGAGCGCGGCTGAATGGGAGG
ATGACATGTACTTGACGAAATTCCGCCTCATTCATGAACTGTATCTTGGAAGCGGCGACCTGAACGTGCTTACAGAATGC
TTTGACCTGCTGGAATCCAGGCAGCTTCTTGCCGACGCCGAAGATCTGCTGCATGATACAGCGGAACGTTTCAATCAGCT
GGAACATTACGAGTCCGCCGCTTTCTTTTACCGCAGGCTGCTGAATATTAAAAAGAAGCTTGCCGAGCAGCGTTTTCAAT
AG

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (219-287)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	42.391	98.66	0.418
rapC	Bacillus subtilis subsp. subtilis str. 168	41.257	98.123	0.405