Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   CJZ70_RS10465 Genome accession   NZ_CP022890
Coordinates   1986444..1987061 (+) Length   205 a.a.
NCBI ID   WP_003238209.1    Uniprot ID   G4NVV3
Organism   Bacillus subtilis strain DKU_NT_02     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1981444..1992061
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CJZ70_RS10430 (CJZ70_10430) ynzD 1981690..1981863 (+) 174 WP_010886518.1 aspartyl-phosphate phosphatase YnzD -
  CJZ70_RS10435 (CJZ70_10435) yneF 1981937..1982155 (-) 219 WP_003221221.1 YneF family protein -
  CJZ70_RS10440 (CJZ70_10440) sirA 1982219..1982683 (-) 465 WP_095010666.1 sporulation inhibitor of replication protein SirA -
  CJZ70_RS10445 (CJZ70_10445) recP/tkt 1982836..1984839 (-) 2004 WP_014476936.1 transketolase Machinery gene
  CJZ70_RS10450 (CJZ70_10450) ynzC 1985008..1985241 (-) 234 WP_003231595.1 DUF896 domain-containing protein -
  CJZ70_RS10455 (CJZ70_10455) dinL 1985305..1985958 (-) 654 WP_014479938.1 recombinase family protein -
  CJZ70_RS10460 (CJZ70_10460) yneA 1985977..1986294 (-) 318 WP_003231598.1 cell division suppressor protein YneA -
  CJZ70_RS10465 (CJZ70_10465) dinR/lexA 1986444..1987061 (+) 618 WP_003238209.1 transcriptional repressor LexA Regulator
  CJZ70_RS21510 - 1987347..1987686 (-) 340 Protein_2071 hypothetical protein -
  CJZ70_RS10470 (CJZ70_10470) fosM 1987610..1988029 (-) 420 WP_014479937.1 FosM family fosfomycin resistance protein -
  CJZ70_RS10475 (CJZ70_10475) - 1988237..1988686 (+) 450 WP_014479935.1 YndM family protein -
  CJZ70_RS10480 (CJZ70_10480) pghL 1988713..1989471 (-) 759 WP_014479934.1 gamma-polyglutamate hydrolase PghL -
  CJZ70_RS10485 (CJZ70_10485) - 1989696..1990010 (-) 315 Protein_2075 hypothetical protein -
  CJZ70_RS10490 (CJZ70_10490) yndJ 1990100..1991740 (-) 1641 WP_095010667.1 YndJ family protein -

Sequence

Protein


Download         Length: 205 a.a.        Molecular weight: 22849.36 Da        Isoelectric Point: 5.1450

>NTDB_id=202834 CJZ70_RS10465 WP_003238209.1 1986444..1987061(+) (dinR/lexA) [Bacillus subtilis strain DKU_NT_02]
MTKLSKRQLDILRFIKAEVKSKGYPPSVREIGEAVGLASSSTVHGHLARLETKGLIRRDPTKPRAIEILDEEVDIPQSQV
VNVPVIGKVTAGSPITAVENIEEYFPLPDRMVPPDEHVFMLEIMGDSMIDAGILDKDYVIVKQQNTANNGEIVVAMTEDD
EATVKRFYKEDTHIRLQPENPTMEPIILQNVSILGKVIGVFRTVH

Nucleotide


Download         Length: 618 bp        

>NTDB_id=202834 CJZ70_RS10465 WP_003238209.1 1986444..1987061(+) (dinR/lexA) [Bacillus subtilis strain DKU_NT_02]
ATGACGAAGCTATCAAAAAGGCAACTTGATATCCTCCGTTTTATTAAAGCAGAGGTTAAATCAAAAGGATATCCGCCTTC
CGTGAGAGAGATCGGAGAGGCTGTCGGGCTTGCGTCCAGCTCTACTGTCCACGGCCATTTGGCCCGCTTGGAAACAAAAG
GGCTGATCAGACGAGATCCGACAAAACCAAGAGCAATAGAAATTCTTGATGAAGAAGTAGACATTCCGCAAAGCCAGGTC
GTTAATGTACCGGTCATCGGGAAAGTCACGGCGGGATCTCCTATTACAGCAGTAGAAAATATTGAAGAATATTTTCCGCT
CCCAGACCGCATGGTTCCTCCAGACGAGCATGTATTTATGCTGGAGATTATGGGAGACAGTATGATAGATGCTGGTATTC
TCGATAAGGACTATGTCATCGTTAAACAGCAAAACACAGCGAACAATGGGGAAATTGTAGTTGCAATGACAGAAGATGAT
GAAGCAACTGTAAAACGATTCTATAAAGAGGATACCCACATTCGCTTGCAGCCTGAGAACCCAACGATGGAACCTATCAT
TTTGCAGAATGTCAGCATTCTAGGGAAAGTGATTGGCGTGTTCAGAACCGTCCATTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(84-198)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVV3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment