Detailed information NTG0202805

Bioinformatically predicted

Overview

• Name: abrB
• Type: Regulator
• Locus tag: BK055_RS08110
• Genome accession: NZ_CP017775
• Coordinates: 1555069..1555353 (+)
• Length: 94 a.a.
• NCBI ID: WP_014417633.1
• Uniprot ID: I2C4H1
• Organism: Bacillus velezensis strain 9912D
• Function: repression of comK; repression of rok (predicted from homology) Competence regulation

Genomic Context

Location: 1550069..1560353

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BK055_RS08090 (BK055_08090)	-	1551315..1552223 (+)	909	WP_025649506.1	ketopantoate reductase family protein	-
BK055_RS08095 (BK055_08095)	-	1552252..1553484 (-)	1233	WP_007409644.1	aminopeptidase	-
BK055_RS21765	-	1553585..1553719 (-)	135	WP_003154559.1	protein YkpC	-
BK055_RS08100 (BK055_08100)	mreBH	1553791..1554798 (-)	1008	WP_014417632.1	cell shape-determining protein MreBH	-
BK055_RS08110 (BK055_08110)	abrB	1555069..1555353 (+)	285	WP_014417633.1	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	Regulator
BK055_RS08115 (BK055_08115)	-	1555526..1556830 (+)	1305	WP_014417634.1	ATP-binding protein	-
BK055_RS08120 (BK055_08120)	-	1556832..1557659 (+)	828	WP_014417635.1	gamma-glutamylcyclotransferase	-
BK055_RS08125 (BK055_08125)	ktrC	1557700..1558365 (+)	666	WP_003154554.1	Ktr system potassium transporter KtrC	-
BK055_RS08130 (BK055_08130)	ade	1558514..1560247 (+)	1734	WP_017417696.1	adenine deaminase	-

Sequence

Protein

• Length: 94 a.a.
• Molecular weight: 10516.38 Da
• Isoelectric Point: 5.8979

>NTDB_id=202805 BK055_RS08110 WP_014417633.1 1555069..1555353(+) (abrB) [Bacillus velezensis strain 9912D]
MKSIGVVRKVDELGRIVMPIELRRALDIAIKDSIEFFVDGDKIVLKKYKPHGICLMTGEITSENQEYGNGKIILSPEGAK
MLLEEIEEALKGRS

Nucleotide

• Length: 285 bp

>NTDB_id=202805 BK055_RS08110 WP_014417633.1 1555069..1555353(+) (abrB) [Bacillus velezensis strain 9912D]
ATGAAATCAATTGGTGTAGTAAGAAAAGTAGACGAACTCGGGCGTATTGTCATGCCGATTGAATTGAGAAGAGCATTGGA
TATCGCTATTAAAGATAGTATTGAATTTTTCGTTGACGGAGACAAAATTGTCTTAAAAAAATACAAGCCGCACGGCATTT
GCTTAATGACGGGGGAAATTACCTCCGAAAATCAGGAGTACGGCAACGGCAAAATTATTTTAAGTCCTGAAGGAGCGAAA
ATGCTGCTTGAGGAAATCGAGGAAGCGTTAAAAGGTAGATCATAA

Domains

Predicted by InterproScan.

• AbrB C-terminal domain (AbrB_C) (54-88)

• Antidote-toxin recognition MazE, bacterial antitoxin (MazE_antitoxin) (8-51)

3D structure

• AlphaFold DB: I2C4H1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
abrB	Bacillus subtilis subsp. subtilis str. 168	55.435	97.872	0.543