Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   BK055_RS07900 Genome accession   NZ_CP017775
Coordinates   1518672..1519136 (-) Length   154 a.a.
NCBI ID   WP_071181737.1    Uniprot ID   -
Organism   Bacillus velezensis strain 9912D     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1513672..1524136
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BK055_RS07885 (BK055_07885) - 1514152..1515972 (+) 1821 WP_021493759.1 PAS domain-containing protein -
  BK055_RS07890 (BK055_07890) - 1515948..1517167 (-) 1220 Protein_1528 aminotransferase A -
  BK055_RS22090 - 1517368..1517529 (-) 162 WP_007409608.1 hypothetical protein -
  BK055_RS07895 (BK055_07895) cheV 1517718..1518629 (+) 912 WP_025649511.1 chemotaxis protein CheV -
  BK055_RS07900 (BK055_07900) kre 1518672..1519136 (-) 465 WP_071181737.1 YkyB family protein Regulator
  BK055_RS07905 (BK055_07905) - 1519259..1520551 (-) 1293 WP_014417606.1 MFS transporter -
  BK055_RS07910 (BK055_07910) - 1520627..1521121 (-) 495 WP_094296114.1 L,D-transpeptidase family protein -
  BK055_RS07915 (BK055_07915) - 1521196..1522059 (-) 864 WP_071181738.1 metallophosphoesterase -
  BK055_RS07920 (BK055_07920) fadH 1522203..1522967 (+) 765 WP_003154618.1 2,4-dienoyl-CoA reductase -
  BK055_RS07925 (BK055_07925) - 1523081..1523629 (+) 549 WP_017417677.1 hypothetical protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17811.66 Da        Isoelectric Point: 10.6498

>NTDB_id=202803 BK055_RS07900 WP_071181737.1 1518672..1519136(-) (kre) [Bacillus velezensis strain 9912D]
MDDHAYSKKLQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFRHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=202803 BK055_RS07900 WP_071181737.1 1518672..1519136(-) (kre) [Bacillus velezensis strain 9912D]
ATGGACGACCACGCTTATTCGAAAAAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCGGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929

Multiple sequence alignment